RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TET1Q8NFU7 2136 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 MAFAQ8NHW3 353 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 DNAJB3Q8WWF6 145 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 SEMA4DQ92854 862 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 HAPLN2Q9GZV7 340 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 ADAMTS10Q9H324 1103 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 MINDY3Q9H8M7 445 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CYP3A43Q9HB55 503 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 CHST12Q9NRB3 414 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 PCDHGC5Q9Y5F6 944 aa11.49□□□□□ -0.57
TRAPPC4-201ENST00000359005 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 DDX3XO00571 662 aaKnown RBP eCLIP11.48□□□□□ -0.578e-12■■■■□ 21.2
TRAPPC4-201ENST00000359005 GPR182O15218 404 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 CYP26A1O43174 497 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 B4GALT5O43286 388 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 MOCS3O95396 460 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 KRT19P08727 400 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 SKIP12755 728 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 FOSL2P15408 326 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 TNFSF9P41273 254 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 NSFP46459 744 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 HADHBP55084 474 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 SNX16P57768 344 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 MRPS6P82932 125 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 VCPIP1Q96JH7 1222 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 MTMR12Q9C0I1 747 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 MIS12Q9H081 205 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 VRTNQ9H8Y1 702 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 CERS4Q9HA82 394 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 KIAA1257Q9ULG3 409 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 CNTN6Q9UQ52 1028 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 TRPV2Q9Y5S1 764 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 NCANO14594 1321 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 EVPLQ92817 2033 aa11.48□□□□□ -0.57
TRAPPC4-201ENST00000359005 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 LACTBL1A8MY62 500 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 MIF4GDA9UHW6 222 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 VNN1O95497 513 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 NPTXRO95502 500 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 LSM8O95777 96 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 EDN1P05305 212 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 CA3P07451 260 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 PFKMP08237 780 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 CXCL8P10145 99 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 GNA15P30679 374 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 RFC2P35250 354 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 THPOP40225 353 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 PNPLA4P41247 253 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 GALCP54803 685 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 OSTNP61366 133 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 TNNC1P63316 161 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 RPS6KA1Q15418 735 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 STILQ15468 1287 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 EEF1DP3Q658K8 133 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 LMBRD2Q68DH5 695 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 TMEM270Q6UE05 265 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 RUFY4Q6ZNE9 571 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 PDCL2Q8N4E4 241 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 GPR161Q8N6U8 529 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 OR5B17Q8NGF7 314 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 RABGGTAQ92696 567 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 TATDN2Q93075 761 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF668Q96K58 619 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 PBKQ96KB5 322 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 NAP1L3Q99457 506 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 OSMRQ99650 979 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 SYT11Q9BT88 431 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 CTTNBP2NLQ9P2B4 639 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 MSRAQ9UJ68 235 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 NOCTQ9UK39 431 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 AJAP1Q9UKB5 411 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 AMFRQ9UKV5 643 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 UBQLN1Q9UMX0 589 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 NENFQ9UMX5 172 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 SNX12Q9UMY4 172 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 PIN4Q9Y237 131 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 SQORQ9Y6N5 450 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
TRAPPC4-201ENST00000359005 REV3LO60673 3130 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 GRID2IPA4D2P6 1211 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms