RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 RNF26Q9BY78 433 aaPredicted RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CEP44Q9C0F1 390 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CSRNP2Q9H175 543 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 NRDE2Q9H7Z3 1164 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 TLE6Q9H808 572 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 STX18Q9P2W9 335 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 DKK3Q9UBP4 350 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 DBR1Q9UK59 544 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 GPC6Q9Y625 555 aaPredicted RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 UMODL1Q5DID0 1318 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 STK36Q9NRP7 1315 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 A0A1W2PRG0 241 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 MATN2O00339 956 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 OPHN1O60890 802 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 PALMO75781 387 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 DDAH1O94760 285 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 FGFR1OPO95684 399 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ITGA9Q13797 1035 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CYTH1Q15438 398 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ABCB5Q2M3G0 1257 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CFAP61Q8NHU2 1237 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 EPS8L3Q8TE67 593 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 EPSTI1Q96J88 318 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 NSMCE3Q96MG7 304 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 HGH1Q9BTY7 390 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 NUP85Q9BW27 656 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC113Q9H0I3 377 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 EXOC1Q9NV70 894 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 QPCTLQ9NXS2 382 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 SSX2IPQ9Y2D8 614 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 HBS1LQ9Y450 684 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ROBO3Q96MS0 1386 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 TRIM64CA6NLI5 447 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 FOXO6A8MYZ6 492 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 PJA2O43164 708 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ATP5HO75947 161 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZBED1O96006 694 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 GH1P01241 217 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 IGHA2P01877 340 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 NUDT17P0C025 328 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 TFPTP0C1Z6 253 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 KRT2P35908 639 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 SLC1A4P43007 532 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 MAGEA1P43355 309 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 EHHADHQ08426 723 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 TNFAIP8L3Q5GJ75 292 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 GIPC3Q8TF64 312 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 GSDMAQ96QA5 445 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 PARK7Q99497 189 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 CADM1Q9BY67 442 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 BLZF1Q9H2G9 400 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 EBF3Q9H4W6 596 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ARMC7Q9H6L4 198 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 ELP3Q9H9T3 547 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 AASDHPPTQ9NRN7 309 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 MORF4L1Q9UBU8 362 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 AMACRQ9UHK6 382 aa9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 RPL26L1Q9UNX3 145 aaKnown RBP9.84□□□□□ -0.83
SMARCAL1-202ENST00000358207 SH3PXD2BA1X283 911 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 MGEA5O60502 916 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 TTLL1O95922 423 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 RCVRNP35243 200 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 PAK1Q13153 545 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 MPP2Q14168 576 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 E2F2Q14209 437 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 C11orf74Q86VG3 221 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 PRICKLE1Q96MT3 831 aaPredicted RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 NOX5Q96PH1 765 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 CELF4Q9BZC1 486 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 IRF2BPLQ9H1B7 796 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 HERC5Q9UII4 1024 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 RBMX2Q9Y388 322 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 MYH4Q9Y623 1939 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 FUOMA2VDF0 154 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 PP2D1A8MPX8 630 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 DDX3XO00571 662 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRAFD1O14545 582 aaPredicted RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 KDM1AO60341 852 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 AGTP01019 485 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 CALM1P0DP23 149 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 CALM2P0DP24 149 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 CALM3P0DP25 149 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPIDQ08752 370 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 ACVR2BQ13705 512 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 GRM4Q14833 912 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 NPY5RQ15761 445 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 KIAA1755Q5JYT7 1200 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 SNRNP48Q6IEG0 339 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCSAPQ6IQ19 270 aaPredicted RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 SLC30A10Q6XR72 485 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 INTS8Q75QN2 995 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 WASF1Q92558 559 aa9.83□□□□□ -0.84
SMARCAL1-202ENST00000358207 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms