RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 KBTBD4Q9NVX7 518 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 XPO7Q9UIA9 1087 aaKnown RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 APOA4P06727 396 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 CCND1P24385 295 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SNX17Q15036 470 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 SPATA2LQ8IUW3 424 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 AGBL3Q8NEM8 1001 aa12.31□□□□□ -0.44
COL9A1-202ENST00000357250 PDCD6IPQ8WUM4 868 aaKnown RBP12.31□□□□□ -0.44
COL9A1-202ENST00000357250 A0A0A6YYK5 440 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 HNRNPRO43390 633 aaKnown RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 POLBP06746 335 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CDH2P19022 906 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ACOT2P49753 483 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 PCYOX1LQ8NBM8 494 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SPON2Q9BUD6 331 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SIK2Q9H0K1 926 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 AGPAT3Q9NRZ7 376 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ANGPT2O15123 496 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 BNIP3LO60238 219 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ESRRBO95718 433 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 GPD1P21695 349 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 COILP38432 576 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CUL3Q13618 768 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ATF7IP2Q5U623 682 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 TRPM8Q7Z2W7 1104 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SLC30A5Q8TAD4 765 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CPA5Q8WXQ8 436 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 MCEEQ96PE7 176 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ERAP1Q9NZ08 941 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 NAGPAQ9UK23 515 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 LCP1P13796 627 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CPB1P15086 417 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 RAB42Q8N4Z0 105 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 CATSPERBQ9H7T0 1116 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 DPYSL4O14531 572 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 RBP3P10745 1247 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 IRAK1P51617 712 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ATPAF2Q8N5M1 289 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 SEC16BQ96JE7 1060 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 EHD4Q9H223 541 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 UBR1Q8IWV7 1749 aa12.3□□□□□ -0.44
COL9A1-202ENST00000357250 ATP9BO43861 1147 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 KCNA2P16389 499 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 GARTP22102 1010 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 NLRP11P59045 1033 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 RMDN1Q96DB5 314 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 NAT9Q9BTE0 207 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 KCNH7Q9NS40 1196 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 HACD3Q9P035 362 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 UBA6A0AVT1 1052 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ANKRD65E5RJM6 399 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 GFAPP14136 432 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 PTK7Q13308 1070 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 LMBRD2Q68DH5 695 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 NAPEPLDQ6IQ20 393 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 DCP1BQ8IZD4 617 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 VGLL2Q8N8G2 317 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 ACER1Q8TDN7 264 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 OTUB1Q96FW1 271 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 NAF1Q96HR8 494 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 MOCS2O96007 188 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 PYGLP06737 847 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 FDFT1P37268 417 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-202ENST00000357250 MAPK7Q13164 816 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
COL9A1-202ENST00000357250 PTK2BQ14289 1009 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms