RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 PDCL2Q8N4E4 241 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 STKLD1Q8NE28 680 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 OR10T2Q8NGX3 314 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 SPPL3Q8TCT6 385 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 ARNTL2Q8WYA1 636 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 RSPH1Q8WYR4 309 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 SENP8Q96LD8 212 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 RHOBTB2Q9BYZ6 727 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 INTS2Q9H0H0 1204 aaKnown RBP4.33□□□□□ -1.72
LIG4-201ENST00000356922 GANQ9H2C0 597 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 UBN1Q9NPG3 1134 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 NLRC4Q9NPP4 1024 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 FAN1Q9Y2M0 1017 aa4.33□□□□□ -1.72
LIG4-201ENST00000356922 ABCB7O75027 752 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ADCY5O95622 1261 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 GYPCP04921 128 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ALDH7A1P49419 539 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 CACNA2D1P54289 1103 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 NOP14P78316 857 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 MYL7Q01449 175 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 POU5F1Q01860 360 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 ADGRE1Q14246 886 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 EXOC3L4Q17RC7 722 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 SPOUT1Q5T280 376 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 FAM171A1Q5VUB5 890 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 DCLRE1AQ6PJP8 1040 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CEP57Q86XR8 500 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 LRRC43Q8N309 656 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 FIBCD1Q8N539 461 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TTC9BQ8N6N2 239 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ANKRD36BP1Q96IX9 119 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 UBE2TQ9NPD8 197 aaPredicted RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 ADAM28Q9UKQ2 775 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 DERAQ9Y315 318 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 NRG2O14511 850 aaPredicted RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 CYB561D2O14569 222 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PER2O15055 1255 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 LILRB3O75022 631 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 EFCAB14O75071 495 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PHACTR2O75167 634 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TADA2AO75478 443 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CAVIN2O95810 425 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 SPATA31D3P0C874 917 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 UCHL3P15374 230 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CYP3A5P20815 502 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CLCN1P35523 988 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PIK3CAP42336 1068 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ZNF75DP51815 510 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ADKP55263 362 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 RBP5P82980 135 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ARHGAP44Q17R89 818 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 SARM1Q6SZW1 724 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 SPATA31D4Q6ZUB0 917 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ADGRD2Q7Z7M1 963 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CD302Q8IX05 232 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PPM1KQ8N3J5 372 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 UBR7Q8N806 425 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 BEST2Q8NFU1 509 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 LNX1Q8TBB1 728 aaPredicted RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TFAP2BQ92481 460 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 BAP1Q92560 729 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ERGIC2Q96RQ1 377 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TRIM5Q9C035 493 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ELOVL4Q9GZR5 314 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CHST7Q9NS84 486 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 KANSL3Q9P2N6 904 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 MAGEC2Q9UBF1 373 aaPredicted RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 CDH22Q9UJ99 828 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ITGA11Q9UKX5 1188 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 ATG2AQ2TAZ0 1938 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 MYBPHLA2RUH7 354 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 M0QZQ0 153 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PMM2O15305 246 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TBC1D4O60343 1298 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TNNC2P02585 160 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PLEKP08567 350 aaPredicted RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 GTF2H1P32780 548 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 POLR2FP61218 127 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 PSMC1P62191 440 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 ZNF699Q32M78 642 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 FUT10Q6P4F1 479 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PAQR9Q6ZVX9 377 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PALB2Q86YC2 1186 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 VPS52Q8N1B4 723 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 SPC24Q8NBT2 197 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 MMS19Q96T76 1030 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 CLSTN3Q9BQT9 956 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 LSM14BQ9BX40 385 aaKnown RBP4.32□□□□□ -1.72
LIG4-201ENST00000356922 BCO2Q9BYV7 579 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 GDAP2Q9NXN4 497 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 DNAJC12Q9UKB3 198 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
LIG4-201ENST00000356922 TULP2O00295 520 aa4.31□□□□□ -1.72
LIG4-201ENST00000356922 CLDN5O00501 218 aa4.31□□□□□ -1.72
LIG4-201ENST00000356922 GABRDO14764 452 aa4.31□□□□□ -1.72
LIG4-201ENST00000356922 GABBR2O75899 941 aa4.31□□□□□ -1.72
LIG4-201ENST00000356922 SOAT2O75908 522 aa4.31□□□□□ -1.72
LIG4-201ENST00000356922 BEST1O76090 585 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms