RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 STK39Q9UEW8 545 aa19.21■□□□□ 0.67
PDLIM7-202ENST00000355841 XIRP2A4UGR9 3374 aa19.21■□□□□ 0.67
PDLIM7-202ENST00000355841 LILRB3O75022 631 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 ODC1P11926 461 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 TCEAL5Q5H9L2 206 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 FBXL13Q8NEE6 735 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 PPM1EQ8WY54 764 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 L1RE1Q9UN81 338 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 VWA8A3KMH1 1905 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 COL6A3P12111 3177 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 ATG2AQ2TAZ0 1938 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 BECN2A8MW95 431 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 SYN3O14994 580 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 ADAM12O43184 909 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 CNPP09543 421 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 ATICP31939 592 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 NRIP1P48552 1158 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 CDR1P51861 262 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 BMS1Q14692 1282 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 PSMD5Q16401 504 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 SOWAHAQ2M3V2 549 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 SGSM1Q2NKQ1 1148 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 MIIPQ5JXC2 388 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 SCARA5Q6ZMJ2 495 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 PDCL2Q8N4E4 241 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 APPL2Q8NEU8 664 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 PIK3R5Q8WYR1 880 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 IGFLR1Q9H665 355 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 RAB20Q9NX57 234 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 LMCD1Q9NZU5 365 aa19.2■□□□□ 0.66
PDLIM7-202ENST00000355841 SMTNL1A8MU46 457 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 PES1O00541 588 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 TEX28O15482 410 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 HUS1O60921 280 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 ASS1P00966 412 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 ZNF18P17022 549 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 POU3F3P20264 500 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 EEF1GP26641 437 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 RBM10P98175 930 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 YWHAHQ04917 246 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 KRT31Q15323 416 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 OVOS1Q6IE37 1185 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 PDE12Q6L8Q7 609 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 CRACR2AQ9BSW2 395 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 NSUN3Q9H649 340 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 TLE6Q9H808 572 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 IRAK3Q9Y616 596 aa19.19■□□□□ 0.66
PDLIM7-202ENST00000355841 HCRTO43612 131 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 CDK11BP21127 795 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 RAP1GAPP47736 663 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 CDH8P55286 799 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 TNNC1P63316 161 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 NOP14P78316 857 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 LRMPQ12912 555 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 ZNF667Q5HYK9 610 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 ANKS3Q6ZW76 656 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 KLHL5Q96PQ7 755 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 VPS16Q9H269 839 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 SMYD3Q9H7B4 428 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 COQ4Q9Y3A0 265 aa19.18■□□□□ 0.66
PDLIM7-202ENST00000355841 TYMPP19971 482 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 PAX3P23760 479 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 ARPP19P56211 112 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 ZNF445P59923 1031 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 CTXN3Q4LDR2 81 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 ADGRF2Q8IZF7 708 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 FAM200AQ8TCP9 573 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 TATDN2Q93075 761 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 MRPL45Q9BRJ2 306 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 NDST4Q9H3R1 872 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 VRTNQ9H8Y1 702 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 SPTBN5Q9NRC6 3674 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 OAZ2O95190 189 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 STAU1O95793 577 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 CYP11A1P05108 521 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 OR4Q2P0C623 313 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 HYAL1Q12794 435 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 OSTM1Q86WC4 334 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 PALB2Q86YC2 1186 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 KBTBD7Q8WVZ9 684 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 TMEM209Q96SK2 561 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 RTP3Q9BQQ7 232 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 EMILIN2Q9BXX0 1053 aa19.17■□□□□ 0.66
PDLIM7-202ENST00000355841 SDCBP2Q9H190 292 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms