RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
VANGL1-202ENST00000355485 OTULINQ96BN8 352 aa8.23□□□□□ -1.09
VANGL1-202ENST00000355485 SPATA16Q9BXB7 569 aa8.23□□□□□ -1.09
VANGL1-202ENST00000355485 DCLRE1BQ9H816 532 aa8.23□□□□□ -1.09
VANGL1-202ENST00000355485 MRPL11Q9Y3B7 192 aaKnown RBP8.23□□□□□ -1.09
VANGL1-202ENST00000355485 ZSCAN9O15535 394 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 LCA5LO95447 670 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TDP2O95551 362 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SERPINB2P05120 415 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 KRT16P08779 473 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 NCKAP1LP55160 1127 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 EIF3EP60228 445 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ITGB3BPQ13352 177 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 KNOP1Q1ED39 458 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TMEM270Q6UE05 265 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TRIM48Q8IWZ4 208 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 NLRP4Q96MN2 994 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SARS2Q9NP81 518 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 MYO3BQ8WXR4 1341 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PSMD12O00232 456 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 DNALI1O14645 258 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 USP1O94782 785 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PTPN4P29074 926 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 BTBD8Q5XKL5 378 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TIGD7Q6NT04 549 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 LLGL2Q6P1M3 1020 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 FAM213AQ9BRX8 229 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TRIM39Q9HCM9 518 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 CACNA2D2Q9NY47 1150 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SNX13Q9Y5W8 968 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 MFN2O95140 757 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 MCAMP43121 646 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 EML3Q32P44 896 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TRAPPC9Q96Q05 1148 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ZNF304Q9HCX3 659 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 R3HDM2Q9Y2K5 976 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 BIRC5O15392 142 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 GDF11O95390 407 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 VAMP7P51809 220 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ZNF438Q7Z4V0 828 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 DDX53Q86TM3 631 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 STK32AQ8WU08 396 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TMEM79Q9BSE2 394 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 REXO4Q9GZR2 422 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 KLHL8Q9P2G9 620 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 GGPS1O95749 300 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 RAG1P15918 1043 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 NMT1P30419 496 aaKnown RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 GALK1P51570 392 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TRAF2Q12933 501 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PFKFB3Q16875 520 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PARP10Q53GL7 1025 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 DEPDC1Q5TB30 811 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 MROH9Q5TGP6 573 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 CNDP1Q96KN2 507 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 FAM96AQ9H5X1 160 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 IPPQ9Y573 584 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PCDH11XQ9BZA7 1347 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PCDH11YQ9BZA8 1340 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 KPNA1P52294 538 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 TBC1D9BQ66K14 1250 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 BRINP3Q76B58 766 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ASPSCR1Q9BZE9 553 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 PIF1Q9H611 641 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 LRRC4Q9HBW1 653 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 CLIC5Q9NZA1 410 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 SNX2O60749 519 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 MPOP05164 745 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 HMOX2P30519 316 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 NEDD8Q15843 81 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 ZNF668Q96K58 619 aaPredicted RBP8.22□□□□□ -1.09
VANGL1-202ENST00000355485 CCSER1Q9C0I3 900 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 CYP39A1Q9NYL5 469 aa8.22□□□□□ -1.09
VANGL1-202ENST00000355485 KCNN4O15554 427 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 MYBP10242 640 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 IMPDH2P12268 514 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 FGFR3P22607 806 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 AVPR1AP37288 418 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 CLK1P49759 484 aaKnown RBP8.21□□□□□ -1.09
VANGL1-202ENST00000355485 CCDC142Q17RM4 750 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 EPC2Q52LR7 807 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 COBLL1Q53SF7 1204 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 PAPD7Q5XG87 772 aaKnown RBP8.21□□□□□ -1.09
VANGL1-202ENST00000355485 KLHL24Q6TFL4 600 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 CEP170P1Q96L14 293 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 GPR108Q9NPR9 543 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 ARMCX1Q9P291 453 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 CTNNAL1Q9UBT7 734 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 SPACA6W5XKT8 324 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 CEP170Q5SW79 1584 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 TAF4O00268 1085 aa8.21□□□□□ -1.09
VANGL1-202ENST00000355485 PDE8BO95263 885 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms