RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 GGCXP38435 758 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 IFT88Q13099 833 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 CEP128Q6ZU80 1094 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 IFT122Q9HBG6 1241 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 SIK3Q9Y2K2 1263 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 KRT7P08729 469 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 TAF6P49848 677 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 FSTL1Q12841 308 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 TFDP2Q14188 446 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 KCTD10Q9H3F6 313 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 RASGRF2O14827 1237 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 KCNA2P16389 499 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 CARSP49589 748 aaKnown RBP13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 AP1B1Q10567 949 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 CCDC6Q16204 474 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 MGAT5BQ3V5L5 792 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 BTBD8Q5XKL5 378 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 LENG9Q96B70 501 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 MED15Q96RN5 788 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 PNKPQ96T60 521 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 HOMER3Q9NSC5 361 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 GPATCH2LQ9NWQ4 482 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 UBQLN1Q9UMX0 589 aaKnown RBP13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 COL18A1P39060 1754 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 RPSAP08865 295 aaKnown RBP13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 PSEN2P49810 448 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 KRT17Q04695 432 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 PDCLQ13371 301 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 CCDC38Q502W7 563 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 SPATA2LQ8IUW3 424 aaPredicted RBP13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 PLA2G6O60733 806 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 CD4P01730 458 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 C9orf72Q96LT7 481 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 GAD1Q99259 594 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
PCDHB11-201ENST00000354757 RAD51CO43502 376 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 ARSEP51690 589 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 ABHD15Q6UXT9 468 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 OR2W6PQ8NHA6 318 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 GDAP1Q8TB36 358 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 OSBPL8Q9BZF1 889 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 M0R2N6 131 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 CST8O60676 142 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 KRT14P02533 472 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 RALAP11233 206 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 SPRYD7Q5W111 196 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 VSIG1Q86XK7 387 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 DMGDHQ9UI17 866 aaKnown RBP13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 GTF3C4Q9UKN8 822 aa13.02□□□□□ -0.32
PCDHB11-201ENST00000354757 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 I3L4J1 428 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 RECQL4O94761 1208 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 BRI3BPQ8WY22 251 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 ZNF536O15090 1300 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 SULT1E1P49888 294 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 GTF2BQ00403 316 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 SETDB1Q15047 1291 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 USP33Q8TEY7 942 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 SYN2Q92777 582 aaPredicted RBP13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 FBXL5Q9UKA1 691 aa13.02□□□□□ -0.33
PCDHB11-201ENST00000354757 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
PCDHB11-201ENST00000354757 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms