RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 HYOU1Q9Y4L1 999 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 SMIM35A0A1B0GVV1 85 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 CREB3O43889 395 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 GJB1P08034 283 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
SYNE1-203ENST00000354674 MAGEA8P43361 318 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 TUBB4BP68371 445 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 STRN3Q13033 797 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 GNASQ5JWF2 1037 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 ZPBP2Q6X784 338 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 TMTC1Q8IUR5 882 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 CCNJLQ8IV13 435 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 CNGA4Q8IV77 575 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 FAM186BQ8IYM0 893 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 METTL13Q8N6R0 699 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 XXYLT1Q8NBI6 393 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 RNF149Q8NC42 400 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 DDX23Q9BUQ8 820 aaKnown RBP10.75□□□□□ -0.69
SYNE1-203ENST00000354674 SPC25Q9HBM1 224 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 XPNPEP3Q9NQH7 507 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 PACSIN2Q9UNF0 486 aaPredicted RBP10.75□□□□□ -0.69
SYNE1-203ENST00000354674 SIK3Q9Y2K2 1263 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 FRMD4BQ9Y2L6 1034 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 FRMPD3Q5JV73 1810 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 TARSL2A2RTX5 802 aaKnown RBP10.75□□□□□ -0.69
SYNE1-203ENST00000354674 A6NHS1 94 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 KIAA0391O15091 583 aaKnown RBP10.75□□□□□ -0.69
SYNE1-203ENST00000354674 PGK1P00558 417 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 CYP2J2P51589 502 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 PAK2Q13177 524 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 TUBB2AQ13885 445 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 P3H1Q32P28 736 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 MGARPQ8TDB4 240 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 SLC35C1Q96A29 364 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 TUBB2BQ9BVA1 445 aa10.75□□□□□ -0.69
SYNE1-203ENST00000354674 EVPLQ92817 2033 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 CCT8L1PA6NM43 557 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 HNRNPRO43390 633 aaKnown RBP10.74□□□□□ -0.69
SYNE1-203ENST00000354674 UBOX5O94941 541 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 CCNFP41002 786 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 MBTD1Q05BQ5 628 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 FIGNQ5HY92 759 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ALS2CLQ60I27 953 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 C14orf80Q86SX3 495 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 SESTD1Q86VW0 696 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ZBTB8OSQ8IWT0 167 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ATL2Q8NHH9 583 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 MAIP1Q8WWC4 291 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 KRT12Q99456 494 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 TTYH3Q9C0H2 523 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 HAPLN2Q9GZV7 340 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 CHMP2BQ9UQN3 213 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ABLIM1O14639 778 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 EXOC3O60645 756 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 INHAP05111 366 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
SYNE1-203ENST00000354674 MYZAPP0CAP1 466 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 SRGAP2CP0DJJ0 459 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 PROZP22891 400 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 KLK7P49862 253 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 CDC42EP1Q00587 391 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 KCNH2Q12809 1159 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 TRIM14Q14142 442 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 LHX8Q68G74 356 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ZSWIM2Q8NEG5 633 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 MAGEC3Q8TD91 643 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 KLHL29Q96CT2 875 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ADAMTS10Q9H324 1103 aa10.74□□□□□ -0.69
SYNE1-203ENST00000354674 ACKR2O00590 384 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 HNRNPDLO14979 420 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TRAPPC3O43617 180 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 GRK4P32298 578 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 GPC3P51654 580 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 RAD23BP54727 409 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 C1QTNF8P60827 252 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 AMHR2Q16671 573 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 SLFN12LQ6IEE8 588 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 CREG2Q8IUH2 290 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 DNAJC5GQ8N7S2 189 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 MFSD14AQ96MC6 490 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 ACO2Q99798 780 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TRIM31Q9BZY9 425 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 MINDY3Q9H8M7 445 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 WDR35Q9P2L0 1181 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 CENPFP49454 3210 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 A0A0B4J269 797 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 C17orf102A2RUQ5 167 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TTLL13PA6NNM8 815 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 GPR32O75388 356 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PRKCBP05771 671 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 IQCF3P0C7M6 154 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms