RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 NEFHP12036 1026 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 GM2AP17900 193 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 PHBP35232 272 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 VHLP40337 213 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 VPS41P49754 854 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 OCRLQ01968 901 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 FAM91A1Q658Y4 838 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 C4orf50Q6ZRC1 276 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 MAEAQ7L5Y9 396 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 FRMD8P1Q9BZ68 369 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 DENND2DQ9H6A0 471 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 KIF9Q9HAQ2 790 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 MAP3K20Q9NYL2 800 aaKnown RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 IP6K2Q9UHH9 426 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 GRID1Q9ULK0 1009 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 RGPD3A6NKT7 1758 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 RGPD4Q7Z3J3 1758 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 JAK3P52333 1124 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 CACNB3P54284 484 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 GEMIN4P57678 1058 aaKnown RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 TAS2R40P59535 323 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 PSMC5P62195 406 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 UBXN2AP68543 259 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 MAMLD1Q13495 774 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 KRT72Q14CN4 511 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 SLC1A5Q15758 541 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
CAPN9-202ENST00000354537 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 GPD1LQ8N335 351 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 DHRS4Q9BTZ2 278 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 VCXQ9H320 206 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 FEM1BQ9UK73 627 aa12.06□□□□□ -0.48
CAPN9-202ENST00000354537 ITGAVP06756 1048 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 PECAM1P16284 738 aaPredicted RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 EPHB2P29323 1055 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 SFNP31947 248 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 RTP1P59025 263 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 LLGL1Q15334 1064 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 KLHL38Q2WGJ6 581 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 RNASEH2BQ5TBB1 312 aaKnown RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ABRAQ8N0Z2 381 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 FEZF2Q8TBJ5 459 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 CPA5Q8WXQ8 436 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 BTBD10Q9BSF8 475 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 PCDH9Q9HC56 1237 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 PARVAQ9NVD7 372 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 CNTN6Q9UQ52 1028 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 MTO1Q9Y2Z2 717 aaKnown RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 POC1B-GALNT4F8VUJ3 575 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ECE1P42892 770 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 NPTX2P47972 431 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 CTCFP49711 727 aaPredicted RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 DMP1Q13316 513 aaPredicted RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
CAPN9-202ENST00000354537 LVRNQ6Q4G3 990 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ADGRD1Q6QNK2 874 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ZFAND2BQ8WV99 257 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 FAM136AQ96C01 138 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 KCNG1Q9UIX4 513 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 EFR3BQ9Y2G0 817 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 ASB3Q9Y575 518 aa12.05□□□□□ -0.48
CAPN9-202ENST00000354537 DPPA5A6NC42 116 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 H0YCG3 227 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 NVLO15381 856 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 GSTA2P09210 222 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ARSEP51690 589 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 VCPP55072 806 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 NOMO3P69849 1222 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 ADCY1Q08828 1119 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 TKFCQ3LXA3 575 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 PRUNE1Q86TP1 453 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 SPOCK2Q92563 424 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 KCNN1Q92952 543 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 PTCD3Q96EY7 689 aaKnown RBP12.04□□□□□ -0.48
CAPN9-202ENST00000354537 NSL1Q96IY1 281 aa12.04□□□□□ -0.48
CAPN9-202ENST00000354537 SLITRK1Q96PX8 696 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms