RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ATP5DP30049 168 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 HIRAP54198 1017 aaPredicted RBP23.46■■□□□ 1.35
UPF3A-201ENST00000351487 NFX1Q12986 1120 aaKnown RBP23.46■■□□□ 1.35
UPF3A-201ENST00000351487 LRRC38Q5VT99 294 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 ACO2Q99798 780 aaKnown RBP23.46■■□□□ 1.35
UPF3A-201ENST00000351487 OSBPL7Q9BZF2 842 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 MTMR12Q9C0I1 747 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 NIF3L1Q9GZT8 377 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 ANK1P16157 1881 aa23.46■■□□□ 1.35
UPF3A-201ENST00000351487 ABLIM1O14639 778 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 OGTO15294 1046 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 PEX10O60683 326 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 KLRC2P26717 231 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 CETN2P41208 172 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 RPL7AP62424 266 aaKnown RBP23.45■■□□□ 1.35
UPF3A-201ENST00000351487 MCL1Q07820 350 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 SURF1Q15526 300 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 CNGA2Q16280 664 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 RCOR2Q8IZ40 523 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 IPO4Q8TEX9 1081 aaKnown RBP23.45■■□□□ 1.35
UPF3A-201ENST00000351487 JPH2Q9BR39 696 aaPredicted RBP23.45■■□□□ 1.35
UPF3A-201ENST00000351487 ZNF518BQ9C0D4 1074 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 SPATC1LQ9H0A9 340 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 CD2APQ9Y5K6 639 aa23.45■■□□□ 1.35
UPF3A-201ENST00000351487 GJB6O95452 261 aa23.45■■□□□ 1.34
UPF3A-201ENST00000351487 ZNF252P-AS1Q0IIN9 211 aa23.45■■□□□ 1.34
UPF3A-201ENST00000351487 DRICH1Q6PGQ1 229 aaPredicted RBP23.45■■□□□ 1.34
UPF3A-201ENST00000351487 TCP11Q8WWU5 503 aa23.45■■□□□ 1.34
UPF3A-201ENST00000351487 EFCC1Q9HA90 598 aa23.45■■□□□ 1.34
UPF3A-201ENST00000351487 NINJ2Q9NZG7 142 aa23.45■■□□□ 1.34
UPF3A-201ENST00000351487 CPSF3Q9UKF6 684 aaKnown RBP23.45■■□□□ 1.34
UPF3A-201ENST00000351487 CDH5P33151 784 aaPredicted RBP23.44■■□□□ 1.34
UPF3A-201ENST00000351487 MYL6P60660 151 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 LMNB2Q03252 620 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 PRKG1Q13976 671 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 MXD4Q14582 209 aaPredicted RBP23.44■■□□□ 1.34
UPF3A-201ENST00000351487 SLITRK1Q96PX8 696 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 FOXP3Q9BZS1 431 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 IGKV6-21A0A0C4DH24 114 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 SSR1P43307 286 aaKnown RBP23.44■■□□□ 1.34
UPF3A-201ENST00000351487 KYNUQ16719 465 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 DUOXA2Q1HG44 320 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 SGSM1Q2NKQ1 1148 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 FBXW10Q5XX13 1052 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 PIGWQ7Z7B1 504 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 ZBTB33Q86T24 672 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 ZBTB8OSQ8IWT0 167 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 CCDC13Q8IYE1 715 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 TMEM35BQ8NCS4 154 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 ARHGEF2Q92974 986 aaKnown RBP23.44■■□□□ 1.34
UPF3A-201ENST00000351487 PRMT1Q99873 361 aaKnown RBP23.44■■□□□ 1.34
UPF3A-201ENST00000351487 TCHPQ9BT92 498 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 CISHQ9NSE2 258 aa23.44■■□□□ 1.34
UPF3A-201ENST00000351487 DICER1Q9UPY3 1922 aaKnown RBP23.43■■□□□ 1.34
UPF3A-201ENST00000351487 LGR5O75473 907 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 PRKCBP05771 671 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 PTPN7P35236 360 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 GJC1P36383 396 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 VPS41P49754 854 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 TAP1Q03518 808 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 LAMTOR4Q0VGL1 99 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 MAPK6Q16659 721 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 CCDC38Q502W7 563 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 LACTB2Q53H82 288 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-201ENST00000351487 ANKRD20A8PQ5CZ79 823 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 IZUMO3Q5VZ72 239 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 HIBCHQ6NVY1 386 aaPredicted RBP23.43■■□□□ 1.34
UPF3A-201ENST00000351487 CEP128Q6ZU80 1094 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 CCHCR1Q8TD31 782 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 FBXO41Q8TF61 875 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 PCDHGC3Q9UN70 934 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 MGAMO43451 1857 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 H0YHG0 523 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 LIASO43766 372 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 BRD2P25440 801 aaKnown RBP23.43■■□□□ 1.34
UPF3A-201ENST00000351487 COPS2P61201 443 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 PPP1R15BQ5SWA1 713 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 DNAJC24Q6P3W2 148 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 NCAPG2Q86XI2 1143 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 EXOC8Q8IYI6 725 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 CCDC197Q8NCU1 140 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 FAM118BQ9BPY3 351 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 LGALS13Q9UHV8 139 aa23.43■■□□□ 1.34
UPF3A-201ENST00000351487 GOLGA6L7A0A1B0GV03 622 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 ZBTB42B2RXF5 422 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 HOXC6P09630 235 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 PROZP22891 400 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 EIF4BP23588 611 aaKnown RBP23.42■■□□□ 1.34
UPF3A-201ENST00000351487 ITIH4Q14624 930 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 LRRC34Q8IZ02 419 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 GPC2Q8N158 579 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 NIPA2Q8N8Q9 360 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 RNF149Q8NC42 400 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 CCT6BQ92526 530 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 FAM212AQ96EL1 285 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 MCEEQ96PE7 176 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 C2orf40Q9H1Z8 148 aa23.42■■□□□ 1.34
UPF3A-201ENST00000351487 TJP3O95049 919 aa23.41■■□□□ 1.34
UPF3A-201ENST00000351487 TCF4P15884 667 aa23.41■■□□□ 1.34
UPF3A-201ENST00000351487 LY6KQ17RY6 165 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms