RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 GUCY1B2O75343 617 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NDUFA8P51970 172 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 KRT31Q15323 416 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZMYND11Q15326 602 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NAB2Q15742 525 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 C4orf17Q53FE4 359 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 TTC19Q6DKK2 380 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 FRMD7Q6ZUT3 714 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 LRRC71Q8N4P6 559 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 GATAD2BQ8WXI9 593 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 EAF1Q96JC9 268 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 JPH2Q9BR39 696 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 JAM3Q9BX67 310 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 CCDC134Q9H6E4 229 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PCDHGA11Q9Y5H2 935 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 SAR1BQ9Y6B6 198 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 GLI2P10070 1586 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ADGRB3O60242 1522 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TARSL2A2RTX5 802 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 CDK2AP1O14519 115 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 F2P00734 622 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 NR1D1P20393 614 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TNFSF4P23510 183 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CIITAP33076 1130 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CDKN1CP49918 316 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 KIF5AQ12840 1032 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KCNAB2Q13303 367 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ALS2CLQ60I27 953 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KLHL10Q6JEL2 608 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KLHDC10Q6PID8 442 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 FBXO11Q86XK2 927 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ZBTB8BQ8NAP8 495 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 STON2Q8WXE9 905 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 BRINP2Q9C0B6 783 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 HAUS4Q9H6D7 363 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 C3orf14Q9HBI5 128 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KCNK9Q9NPC2 374 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PXDNLA1KZ92 1463 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PPRC1Q5VV67 1664 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 GOLGA8SH3BPF8 625 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 hCG_1984214I3L0E3 225 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 M0QYG6 137 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TRIM38O00635 465 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 SOAT2O75908 522 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 LUC7L3O95232 432 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 ALDH2P05091 517 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 VDRP11473 427 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 FCER1AP12319 257 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ADCY8P40145 1251 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 AFMP43652 599 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 BAG6P46379 1132 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ARF5P84085 180 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 AP1B1Q10567 949 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 USH1GQ495M9 461 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PLEKHO1Q53GL0 409 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 PLEKHG4Q58EX7 1191 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 FAM26FQ5R3K3 315 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 SLC30A6Q6NXT4 461 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TXNRD3Q86VQ6 643 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TMPRSS6Q8IU80 811 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 IFT20Q8IY31 132 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KIAA0319LQ8IZA0 1049 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ZKSCAN4Q969J2 545 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 TADA1Q96BN2 335 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CLPTM1LQ96KA5 538 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 MXD3Q9BW11 206 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 LGR4Q9BXB1 951 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CARD9Q9H257 536 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 AKIRIN1Q9H9L7 192 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 CCDC177Q9NQR7 707 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 FBXO28Q9NVF7 368 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 DNAJB12Q9NXW2 375 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 BACE2Q9Y5Z0 518 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ZFYVE16Q7Z3T8 1539 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 FAM47DPA6NHR8 397 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 H3BS24 57 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CES2O00748 559 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 P4HA2O15460 535 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TMCC2O75069 709 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CTPS1P17812 591 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 GCKP35557 465 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 SLC15A1P46059 708 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 LBX1P52954 281 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CETN1Q12798 172 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFC1-201ENST00000349703 CCDC122Q5T0U0 273 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 BROXQ5VW32 411 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PXKQ7Z7A4 578 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 USP29Q9HBJ7 922 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms