RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OGDHLQ9ULD0 1010 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 DNAH12Q6ZR08 3092 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 MED7O43513 233 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 ZNF623O75123 536 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 NSFP46459 744 aaKnown RBP19.91■□□□□ 0.78
PTN-201ENST00000348225 CDK7P50613 346 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 CENPCQ03188 943 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 DSC3Q14574 896 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 WHAMMP3Q1A5X7 153 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 ZNF394Q53GI3 561 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 TPCN2Q8NHX9 752 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 PGBD4Q96DM1 585 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 ARHGEF26Q96DR7 871 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 SDCBP2Q9H190 292 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 GTF3C4Q9UKN8 822 aa19.91■□□□□ 0.78
PTN-201ENST00000348225 PIRO00625 290 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 CILPO75339 1184 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 LSM8O95777 96 aaKnown RBP19.9■□□□□ 0.78
PTN-201ENST00000348225 MYCP01106 439 aaPredicted RBP19.9■□□□□ 0.78
PTN-201ENST00000348225 MYBL1P10243 752 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 HADHBP55084 474 aaKnown RBP19.9■□□□□ 0.78
PTN-201ENST00000348225 CDH8P55286 799 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 INCA1Q0VD86 236 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 ZNF653Q96CK0 615 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 BARX2Q9UMQ3 279 aaPredicted RBP19.9■□□□□ 0.78
PTN-201ENST00000348225 CEP83Q9Y592 693 aa19.9■□□□□ 0.78
PTN-201ENST00000348225 PTGESO14684 152 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 PRLRP16471 622 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 NOMO3P69849 1222 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 BFSP2Q13515 415 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 SV2CQ496J9 727 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 NAA35Q5VZE5 725 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 CEP112Q8N8E3 955 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 CYFIP2Q96F07 1278 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 PPP1R10Q96QC0 940 aaKnown RBP19.89■□□□□ 0.77
PTN-201ENST00000348225 ADAM2Q99965 735 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 CARD6Q9BX69 1037 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 OSBPL7Q9BZF2 842 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 UBN1Q9NPG3 1134 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 CTTNBP2NLQ9P2B4 639 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 SNX12Q9UMY4 172 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 PCDHGC3Q9UN70 934 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 HYOU1Q9Y4L1 999 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 SNX9Q9Y5X1 595 aa19.89■□□□□ 0.77
PTN-201ENST00000348225 SCN1AP35498 2009 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 A0A0U1RQF3 1178 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 PPEF2O14830 753 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 MGEA5O60502 916 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 CYP1A2P05177 515 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 CD19P15391 556 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 TCP1P17987 556 aaKnown RBP19.88■□□□□ 0.77
PTN-201ENST00000348225 BRD2P25440 801 aaKnown RBP19.88■□□□□ 0.77
PTN-201ENST00000348225 LRPAP1P30533 357 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 MLH1P40692 756 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 TAF6P49848 677 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 RAD23BP54727 409 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 TRAF7Q6Q0C0 670 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 LRRC8DQ7L1W4 858 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 PASD1Q8IV76 773 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 FAM126BQ8IXS8 530 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 LRRC57Q8N9N7 239 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 TMEM176AQ96HP8 235 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 ZFP42Q96MM3 310 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 ZNF518BQ9C0D4 1074 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 OSGEPQ9NPF4 335 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 UVRAGQ9P2Y5 699 aa19.88■□□□□ 0.77
PTN-201ENST00000348225 CTIFO43310 598 aaKnown RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 MTA2O94776 668 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 FTCDO95954 541 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 THP07101 528 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 SELPP16109 830 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 MEI1Q5TIA1 1274 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 LIN9Q5TKA1 542 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 DAAM2Q86T65 1068 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 MCOLN2Q8IZK6 566 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 SLC4A11Q8NBS3 891 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 TMEM35BQ8NCS4 154 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 CPA5Q8WXQ8 436 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 VCPIP1Q96JH7 1222 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 GAD1Q99259 594 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 AVENQ9NQS1 362 aaPredicted RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 RNF19AQ9NV58 838 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 KIAA1257Q9ULG3 409 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 FAM170AA1A519 330 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 SOX4Q06945 474 aaPredicted RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 CKAP4Q07065 602 aaKnown RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 AGMOQ6ZNB7 445 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 SLFN11Q7Z7L1 901 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 PHF13Q86YI8 300 aaPredicted RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 WHAMMQ8TF30 809 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 LPPQ93052 612 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 NT5C1AQ9BXI3 368 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 TLR10Q9BXR5 811 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 ELOVL4Q9GZR5 314 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 DNAI2Q9GZS0 605 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 RSAD1Q9HA92 442 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 GDAP2Q9NXN4 497 aa19.87■□□□□ 0.77
PTN-201ENST00000348225 CNOT8Q9UFF9 292 aaKnown RBP19.87■□□□□ 0.77
PTN-201ENST00000348225 ARL5CA6NH57 179 aa19.86■□□□□ 0.77
PTN-201ENST00000348225 KPNA7A9QM74 516 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms