RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 NPTXRO95502 500 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 FDX1P10109 184 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TSHRP16473 764 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PTPN7P35236 360 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 GEMIN4P57678 1058 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ADCY1Q08828 1119 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CCDC6Q16204 474 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 MUM1Q2TAK8 710 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 FAM102BQ5T8I3 360 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SEPT14Q6ZU15 432 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ALLCQ8N6M5 410 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TMEM161BQ8NDZ6 487 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 POMGNT1Q8WZA1 660 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PARVAQ9NVD7 372 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TYROBPO43914 113 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 DKC1O60832 514 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 FESP07332 822 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 VHLP40337 213 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SSR1P43307 286 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SARNPP82979 210 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 EFHC2Q5JST6 749 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TRIM68Q6AZZ1 485 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PLEKHA7Q6IQ23 1121 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 IRGCQ6NXR0 463 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PHF13Q86YI8 300 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 RDM1Q8NG50 284 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ZNF483Q8TF39 744 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CPA5Q8WXQ8 436 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ZNF75CPQ92670 426 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 HERPUD2Q9BSE4 406 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 AGO4Q9HCK5 861 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CYLDQ9NQC7 956 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 DDX56Q9NY93 547 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6B-202ENST00000347691 FOXO6A8MYZ6 492 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SKAP2O75563 359 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SKIP12755 728 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ATP4AP20648 1035 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 GCAP28676 217 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ECE1P42892 770 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ARSEP51690 589 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PKN2Q16513 984 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 XKR9Q5GH70 373 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ZNF449Q6P9G9 518 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ATP11CQ8NB49 1132 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PWWP2AQ96N64 755 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 FAM167BQ9BTA0 163 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TRIM55Q9BYV6 548 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 VPS11Q9H270 941 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PCDH9Q9HC56 1237 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■■■■■ 74.5
TRAPPC6B-202ENST00000347691 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SMCHD1A6NHR9 2005 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 DENND3A2RUS2 1198 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 NVLO15381 856 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 DHX15O43143 795 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ITGB5P18084 799 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 EPHB2P29323 1055 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ABL2P42684 1182 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PTDSS1P48651 473 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 MXRA7P84157 204 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 GPS1Q13098 491 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TAF1BQ53T94 588 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 LVRNQ6Q4G3 990 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ZSWIM2Q8NEG5 633 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 NGLY1Q96IV0 654 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 MMADHCQ9H3L0 296 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 KIF9Q9HAQ2 790 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
TRAPPC6B-202ENST00000347691 WDR64B1ANS9 1081 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TLR3O15455 904 aaKnown RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 HAUS5O94927 633 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ITGAVP06756 1048 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 T-ENOLP0DO92 83 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 PECAM1P16284 738 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TBXAS1P24557 533 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 NPTX2P47972 431 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 CTCFP49711 727 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 VCPP55072 806 aaKnown RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 KRT76Q01546 638 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 TAP1Q03518 808 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 MAMLD1Q13495 774 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 RBBP5Q15291 538 aaKnown RBP10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 ZFYVE27Q5T4F4 411 aa10.67□□□□□ -0.7
TRAPPC6B-202ENST00000347691 OTOAQ7RTW8 1153 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms