RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ZNRF3Q9ULT6 936 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 SLIT1O75093 1534 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
UBE4B-202ENST00000343090 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 GOLGA8CPA6NN73 597 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 KPNA7A9QM74 516 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 KRT10P13645 584 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 ESRRGP62508 458 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 CENPPQ6IPU0 288 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 CXorf38Q8TB03 319 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 SLC20A1Q8WUM9 679 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 PGBD4Q96DM1 585 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 ATG4CQ96DT6 458 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 CLMNQ96JQ2 1002 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 KCND2Q9NZV8 630 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 PNMA3Q9UL41 463 aa8.47□□□□□ -1.05
UBE4B-202ENST00000343090 TAC1P20366 129 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 EFNA5P52803 228 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 RPS6P62753 249 aaKnown RBP8.46□□□□□ -1.05
UBE4B-202ENST00000343090 FSCBQ5H9T9 825 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ACAP3Q96P50 834 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 MKNK1Q9BUB5 465 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 TEX13BQ9BXU2 312 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ADA2Q9NZK5 511 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 PCDHB2Q9Y5E7 798 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 SPATA31A5Q5VU36 1347 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 SPATA31A7Q8IWB4 1347 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ARHGAP10A1A4S6 786 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 TYW5A2RUC4 315 aaKnown RBP8.46□□□□□ -1.05
UBE4B-202ENST00000343090 FAM47DPA6NHR8 397 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 DFFAO00273 331 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 VEGFAP15692 232 aaPredicted RBP8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ACADSP16219 412 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 TAP1Q03518 808 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 LRRC36Q1X8D7 754 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ARMC3Q5W041 872 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 SLC13A5Q86YT5 568 aaPredicted RBP8.46□□□□□ -1.05
UBE4B-202ENST00000343090 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 FAM151AQ8WW52 585 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 RIT2Q99578 217 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 CNOT7Q9UIV1 285 aaKnown RBP8.46□□□□□ -1.05
UBE4B-202ENST00000343090 STAP1Q9ULZ2 295 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 TBX20Q9UMR3 447 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 MROH1Q8NDA8 1641 aa8.46□□□□□ -1.05
UBE4B-202ENST00000343090 BAZ2BQ9UIF8 2168 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CST8O60676 142 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 FAM200BP0CF97 657 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 PAMP19021 973 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 PGM1P36871 562 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CACNA2D1P54289 1103 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 C16orf87Q6PH81 154 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 C3orf62Q6ZUJ4 267 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 SYDE1Q6ZW31 735 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 APOBEC3FQ8IUX4 373 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 FAM81AQ8TBF8 368 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 DHX38Q92620 1227 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 TIPINQ9BVW5 301 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 TSSK1BQ9BXA7 367 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 TRPV6Q9H1D0 765 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CACYBPQ9HB71 228 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 SARS2Q9NP81 518 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 PCMTD2Q9NV79 361 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 BFARQ9NZS9 450 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 ZC3H7BQ9UGR2 993 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 MAP3K6O95382 1288 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 AP3M2P53677 418 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CYLC2Q14093 348 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 RCN1Q15293 331 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 C1orf131Q8NDD1 294 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 CCDC138Q96M89 665 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.06
UBE4B-202ENST00000343090 ZCWPW1Q9H0M4 648 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 GGA2Q9UJY4 613 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 NWD1Q149M9 1564 aa8.46□□□□□ -1.06
UBE4B-202ENST00000343090 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 NEMP1O14524 444 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 APOEP02649 317 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 XPAP23025 273 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 SOX10P56693 466 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 FASTKD1Q53R41 847 aaKnown RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 FAM71DQ8N9W8 422 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF280CQ8ND82 737 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 USP33Q8TEY7 942 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 UPF3AQ9H1J1 476 aaKnown RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 KRT82Q9NSB4 513 aa8.45□□□□□ -1.06
UBE4B-202ENST00000343090 PSMC3IPQ9P2W1 217 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-202ENST00000343090 HAO1Q9UJM8 370 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms