RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 MEIS2O14770 477 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 SLURP2P0DP57 97 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 PSEN2P49810 448 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 ACOT1Q86TX2 421 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 TINF2Q9BSI4 451 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 BAG5Q9UL15 447 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 C2CD2LO14523 706 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 SGPL1O95470 568 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 UBA1P22314 1058 aaKnown RBP20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 NOP9Q86U38 636 aaKnown RBP20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 DNAJC7Q99615 494 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 CATSPERBQ9H7T0 1116 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 SH3BP1Q9Y3L3 701 aa20.58■□□□□ 0.89
SEMA6C-201ENST00000341697 CTIFO43310 598 aaKnown RBP20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 AP1G2O75843 785 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 SLC12A1Q13621 1099 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 HMX1Q9NP08 348 aaPredicted RBP20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 AKAP12Q02952 1782 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 HSPA4LO95757 839 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 FGRP09769 529 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 IFT88Q13099 833 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 DBN1Q16643 649 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 RGMBQ6NW40 437 aa20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 SPDYE1Q8NFV5 336 aaPredicted RBP20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.88
SEMA6C-201ENST00000341697 PSMD3O43242 534 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 CXCL8P10145 99 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ADGRF2Q8IZF7 708 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ALKBH8Q96BT7 664 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 DSEQ9UL01 958 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 TRAF3IP3Q9Y228 551 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 TMPRSS15P98073 1019 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 C10orf120Q5SQS8 335 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 SV2AQ7L0J3 742 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 RASSF3Q86WH2 238 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 TRAPPC12Q8WVT3 735 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 CYP3A43Q9HB55 503 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ATP11BQ9Y2G3 1177 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ATP9BO43861 1147 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 SNX2O60749 519 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 RAB27AP51159 221 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 P3H1Q32P28 736 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 CDKAL1Q5VV42 579 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 PHLDB3Q6NSJ2 640 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 EPM2AIP1Q7L775 607 aaPredicted RBP20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ZNF410Q86VK4 478 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ARHGEF26Q96DR7 871 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 SYT17Q9BSW7 474 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 TRAIPQ9BWF2 469 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 SLC15A5A6NIM6 579 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 KPNA7A9QM74 516 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 E5RI56 91 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 HARS2P49590 506 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 ZPBP2Q6X784 338 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 MOB2Q70IA6 237 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 RUBCNQ92622 972 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 LRRC1Q9BTT6 524 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 KCNMB3Q9NPA1 279 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 BLOC1S4Q9NUP1 217 aa20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 BAZ2BQ9UIF8 2168 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-201ENST00000341697 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 GTPBP10A4D1E9 387 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ADCY3O60266 1144 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 CYP11B1P15538 503 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 BOLA3Q53S33 107 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 CRLF3Q8IUI8 442 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.56■□□□□ 0.887e-6■■□□□ 14.3
SEMA6C-201ENST00000341697 TRIM17Q9Y577 477 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ACKR2O00590 384 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 MYL6P60660 151 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 THAP2Q9H0W7 228 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ABCC6O95255 1503 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 TMEM150BA6NC51 233 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 LGALS2P05162 132 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ACO1P21399 889 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ST8SIA6P61647 398 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 NSUN2Q08J23 767 aaKnown RBP eCLIP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 NCAPHQ15003 741 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 PDK1Q15118 436 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 LRG1P02750 347 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 CELF3Q5SZQ8 465 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 NUGGCQ68CJ6 796 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 PABPC5Q96DU9 382 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 DDX27Q96GQ7 796 aaKnown RBP20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 ZNF518BQ9C0D4 1074 aa20.56■□□□□ 0.88
SEMA6C-201ENST00000341697 IRF1P10914 325 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 BYSLQ13895 437 aaKnown RBP20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 TMEM132BQ14DG7 1078 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 PAN2Q504Q3 1202 aaKnown RBP20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 IL31Q6EBC2 164 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 SLC27A1Q6PCB7 646 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 SNTG2Q9NY99 539 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 ITGA11Q9UKX5 1188 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 A0A087X0T9 212 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 YDJCA8MPS7 323 aa20.55■□□□□ 0.88
SEMA6C-201ENST00000341697 TXNDC9O14530 226 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms