RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 FAM153CQ494X1 144 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 C4orf22Q6V702 233 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 PRUNE1Q86TP1 453 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 DLG3Q92796 817 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 PIDD1Q9HB75 910 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 TUFT1Q9NNX1 390 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 ZNF224Q9NZL3 707 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 SMCO2A6NFE2 343 aa13.21□□□□□ -0.3
BRPF3-201ENST00000339717 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.3
BRPF3-201ENST00000339717 PIK3CAP42336 1068 aa13.21□□□□□ -0.3
BRPF3-201ENST00000339717 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.21□□□□□ -0.3
BRPF3-201ENST00000339717 ZBTB49Q6ZSB9 765 aa13.21□□□□□ -0.3
BRPF3-201ENST00000339717 ACTRT1Q8TDG2 376 aa13.21□□□□□ -0.3
BRPF3-201ENST00000339717 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.3
BRPF3-201ENST00000339717 MPP6Q9NZW5 540 aa13.21□□□□□ -0.3
BRPF3-201ENST00000339717 A0A0G2JPF8 293 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 FAM170AA1A519 330 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 TRPC5OSA6NMA1 111 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 B4E1Z4 1266 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 HNRNPCL3B7ZW38 293 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 KRT1P04264 644 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 HNRNPCL4P0DMR1 293 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 OR8H2Q8N162 312 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 MTERF3Q96E29 417 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 C19orf60Q96EN9 201 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 C8orf48Q96LL4 319 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 CES2O00748 559 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 MAGEA10P43363 369 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF829Q3KNS6 432 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SPANXN2Q5MJ10 180 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ARL6IP4Q66PJ3 421 aaKnown RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 TMEM214Q6NUQ4 689 aaKnown RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF507Q8TCN5 953 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 MTMR9Q96QG7 549 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 RAB26Q9ULW5 256 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SAGE2PA6NJ88 616 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 PTGDRQ13258 359 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 CCDC85BQ15834 202 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 RABL6Q3YEC7 729 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SLC2A7Q6PXP3 512 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SNX31Q8N9S9 440 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 STARD8Q92502 1023 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 SH3D21A4FU49 640 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 LAD1O00515 517 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ALOX12P18054 663 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 VCLP18206 1134 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF717Q9BY31 904 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 DCLK3Q9C098 648 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
BRPF3-201ENST00000339717 DNAJC11Q9NVH1 559 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 ING3Q9NXR8 418 aa13.2□□□□□ -0.3
BRPF3-201ENST00000339717 PFASO15067 1338 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 FAM172BPA6NC97 362 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 AGPSO00116 658 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 BMP10O95393 424 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 PCNAP12004 261 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SLC5A3P53794 718 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 RAD23AP54725 363 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SLC8A2Q9UPR5 921 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 MYOM2P54296 1465 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 PDPK1O15530 556 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 FOXO3O43524 673 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 AK8Q96MA6 479 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 CLDN25C9JDP6 229 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 EXTL3O43909 919 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ATF6P18850 670 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 MAPK4P31152 587 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 NPTX2P47972 431 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 PLS1Q14651 629 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 HADHQ16836 314 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms