RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 STRA6Q9BX79 667 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 UBE4BO95155 1302 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 LRRIQ4A6NIV6 560 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 PROSCO94903 275 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 OSTNP61366 133 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 RCN2Q14257 317 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 ANO5Q75V66 913 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CCDC33Q8N5R6 958 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 PTPRJQ12913 1337 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 DPPA5A6NC42 116 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 BASP1P80723 227 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 GTF2BQ00403 316 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 ANKRD22Q5VYY1 191 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 ZBTB33Q86T24 672 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 TTC7BQ86TV6 843 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 C12orf50Q8NA57 414 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 TCHPQ9BT92 498 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 MYPNQ86TC9 1320 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 DHX15O43143 795 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 PEX11AO75192 247 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 ASMTLO95671 621 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 GCAP28676 217 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 PTDSS1P48651 473 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 MTMR2Q13614 643 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 NFIL3Q16649 462 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 CDR2LQ86X02 465 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 MORC4Q8TE76 937 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 UCMAQ8WVF2 138 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 MAML1Q92585 1016 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 AGO4Q9HCK5 861 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 SMIM24O75264 130 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 NPR1P16066 1061 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 BRD2P25440 801 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 CETN2P41208 172 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 MAMLD1Q13495 774 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 KHDC1Q4VXA5 237 aaKnown RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 PYROXD1Q8WU10 500 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 ZNF75CPQ92670 426 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-202ENST00000339570 CYTH2Q99418 400 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 RNPEPL1Q9HAU8 725 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 EXOC7Q9UPT5 735 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 CHMP2BQ9UQN3 213 aa17.03■□□□□ 0.32
SCARB1-202ENST00000339570 T-ENOLP0DO92 83 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 SLC8A3P57103 927 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 ALCAMQ13740 583 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 C3orf62Q6ZUJ4 267 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 NLRX1Q86UT6 975 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 CTAGE3PQ8IX95 158 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 VPS52Q8N1B4 723 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 TCP10LQ8TDR4 215 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 MCUR1Q96AQ8 359 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 PIDD1Q9HB75 910 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 TMX2Q9Y320 296 aa17.02■□□□□ 0.32
SCARB1-202ENST00000339570 KRT36O76013 467 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 UNGP13051 313 aaPredicted RBP17.02■□□□□ 0.31
SCARB1-202ENST00000339570 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.31
SCARB1-202ENST00000339570 GDF10P55107 478 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 RCN1Q15293 331 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 ARHGEF16Q5VV41 709 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 ISLR2Q6UXK2 745 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 ZC3H18Q86VM9 953 aaKnown RBP17.02■□□□□ 0.31
SCARB1-202ENST00000339570 MASTLQ96GX5 879 aa17.02■□□□□ 0.31
SCARB1-202ENST00000339570 WEE2P0C1S8 567 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 MSS51Q4VC12 460 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 TMEM154Q6P9G4 183 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 PALM2Q8IXS6 379 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 EMC1Q8N766 993 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 RIT2Q99578 217 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 KCND2Q9NZV8 630 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 TJP2Q9UDY2 1190 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 P4HA2O15460 535 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 SMNDC1O75940 238 aaKnown RBP eCLIP17.01■□□□□ 0.316e-24■■■■■ 32.4
SCARB1-202ENST00000339570 MTA2O94776 668 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 GPC3P51654 580 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 FAXCQ5TGI0 409 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 FYB2Q5VWT5 728 aa17.01■□□□□ 0.31
SCARB1-202ENST00000339570 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-202ENST00000339570 PTPRN2Q92932 1015 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms