RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 RALAP11233 206 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MAN1A1P33908 653 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AP3M2P53677 418 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 KRT17Q04695 432 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ADCY2Q08462 1091 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SNX1Q13596 522 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PTK6Q13882 451 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MAPK6Q16659 721 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 KRT71Q3SY84 523 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MPZL3Q6UWV2 235 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CDR2LQ86X02 465 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 KATNAL2Q8IYT4 538 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TCP11Q8WWU5 503 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 OPTNQ96CV9 577 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RUNDC3BQ96NL0 473 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 EPN3Q9H201 632 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ADAM7Q9H2U9 754 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CISHQ9NSE2 258 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 A6NNZ2 444 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ANKRD65E5RJM6 399 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ACKR2O00590 384 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RIPK2O43353 540 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 B4GALT4O60513 344 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PAEPP09466 180 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FGFR4P22455 802 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CDH5P33151 784 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CHKAP35790 457 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SEC24CP53992 1094 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 EIF3BP55884 814 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MAGOHP61326 146 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PPARDQ03181 441 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NOGQ13253 232 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AMHR2Q16671 573 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TUBB8Q3ZCM7 444 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 KCNV1Q6PIU1 500 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TMEM109Q9BVC6 243 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CDT1Q9H211 546 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GOLGA6L10A6NI86 522 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GPR25O00155 361 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CD58P19256 250 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TMOD1P28289 359 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GBP1P32455 592 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 DUOXA2Q1HG44 320 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ATP13A4Q4VNC1 1196 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 LIN9Q5TKA1 542 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZBTB8OSQ8IWT0 167 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 C2orf40Q9H1Z8 148 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 EFCC1Q9HA90 598 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 IFT122Q9HBG6 1241 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 WHRNQ9P202 907 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NOP56O00567 594 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TLR3O15455 904 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TXNP10599 105 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 RARGP13631 454 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CORO7P57737 925 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PPP2R2AP63151 447 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TAPT1Q6NXT6 567 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 RHOT1Q8IXI2 618 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TJP2Q9UDY2 1190 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.21
CDK5RAP1-201ENST00000339269 LSM8O95777 96 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 CXCL8P10145 99 aa13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 MAP2K2P36507 400 aa13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 TFAMQ00059 246 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 KCTD2Q14681 263 aa13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 ZNF394Q53GI3 561 aa13.76□□□□□ -0.21
CDK5RAP1-201ENST00000339269 DENND2CQ68D51 928 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms