RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ZSWIM1Q9BR11 485 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
LRP1-202ENST00000338962 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.82□□□□□ -0.52
LRP1-202ENST00000338962 A0A1W2PQ45 241 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 A0A1W2PQY0 241 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 ITGA4P13612 1032 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CARSP49589 748 aaKnown RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 CENPCQ03188 943 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 ZNF211Q13398 564 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 NAA35Q5VZE5 725 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 UBE2Q1Q7Z7E8 422 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 SLC43A3Q8NBI5 491 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CCDC26Q8TAB7 109 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CPA5Q8WXQ8 436 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 SEZ6LQ9BYH1 1024 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CWC15Q9P013 229 aaKnown RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 NFU1Q9UMS0 254 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 TNFSF13BQ9Y275 285 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 UMODL1Q5DID0 1318 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 COL1A2P08123 1366 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 THAP12O43422 761 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CST3P01034 146 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 TNNC2P02585 160 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 IQCF3P0C7M6 154 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 HOXC8P31273 242 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 PSEN2P49810 448 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 MFSD10Q14728 455 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 PPP2R5EQ16537 467 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 EEF1DP3Q658K8 133 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 MCOLN2Q8IZK6 566 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CEP120Q8N960 986 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 KRT35Q92764 455 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 BTBD6Q96KE9 485 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 NIF3L1Q9GZT8 377 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CDT1Q9H211 546 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 AVENQ9NQS1 362 aaPredicted RBP11.81□□□□□ -0.52
LRP1-202ENST00000338962 AMACRQ9UHK6 382 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 ANAPC7Q9UJX3 599 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
LRP1-202ENST00000338962 A0A087WZ62 844 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 B4GALT4O60513 344 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 CYP1A1P04798 512 aaPredicted RBP11.8□□□□□ -0.52
LRP1-202ENST00000338962 EN2P19622 333 aaPredicted RBP11.8□□□□□ -0.52
LRP1-202ENST00000338962 MARCKSL1P49006 195 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 AARSP49588 968 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRP1-202ENST00000338962 MYL6P60660 151 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 NNTQ13423 1086 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 ZNF699Q32M78 642 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 SEL1L2Q5TEA6 688 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 C1orf53Q5VUE5 145 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 PASD1Q8IV76 773 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 FAM71BQ8TC56 605 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 CYFIP2Q96F07 1278 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 SCLT1Q96NL6 688 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
LRP1-202ENST00000338962 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
LRP1-202ENST00000338962 EVPLQ92817 2033 aa11.8□□□□□ -0.52
LRP1-202ENST00000338962 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
LRP1-202ENST00000338962 IL18RAPO95256 599 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 VTNP04004 478 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 CXCL8P10145 99 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 CD58P19256 250 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 RRM1P23921 792 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 CTNNA1P35221 906 aaKnown RBP11.79□□□□□ -0.52
LRP1-202ENST00000338962 CDK7P50613 346 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 ADAM17P78536 824 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
LRP1-202ENST00000338962 CUL1Q13616 776 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 HLTFQ14527 1009 aaKnown RBP eCLIP11.79□□□□□ -0.52
LRP1-202ENST00000338962 FAM187BQ17R55 369 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
LRP1-202ENST00000338962 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 CASKIN2Q8WXE0 1202 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
LRP1-202ENST00000338962 CD101Q93033 1021 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 EXOC4Q96A65 974 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 STARD7Q9NQZ5 370 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 PSD3Q9NYI0 1048 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 VPS18Q9P253 973 aa11.79□□□□□ -0.52
LRP1-202ENST00000338962 NRCAMQ92823 1304 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms