RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 DDX27Q96GQ7 796 aaKnown RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 TMEM169Q96HH4 297 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 SENP8Q96LD8 212 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 ARID3AQ99856 593 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 MAGEC2Q9UBF1 373 aaPredicted RBP13.51□□□□□ -0.25
PRIM1-201ENST00000338193 L1RE1Q9UN81 338 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 COQ4Q9Y3A0 265 aa13.51□□□□□ -0.25
PRIM1-201ENST00000338193 SMTNL1A8MU46 457 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 BECN2A8MW95 431 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 C2CD2LO14523 706 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 ADAM12O43184 909 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 TEX33O43247 280 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
PRIM1-201ENST00000338193 GTF2H1P32780 548 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 TAF6P49848 677 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 CDH8P55286 799 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 LRMPQ12912 555 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 SCARA5Q6ZMJ2 495 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 DDX53Q86TM3 631 aaKnown RBP13.5□□□□□ -0.25
PRIM1-201ENST00000338193 FAM114A1Q8IWE2 563 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 LRRC52Q8N7C0 313 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 SUSD3Q96L08 255 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 RTP3Q9BQQ7 232 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 HERC2P3Q9BVR0 1158 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 PLVAPQ9BX97 442 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 SIX2Q9NPC8 291 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 AAASQ9NRG9 546 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 RAB20Q9NX57 234 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
PRIM1-201ENST00000338193 HIDE1A8MVS5 230 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 M0QZQ0 153 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 FSCN2O14926 492 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 RB1P06400 928 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 RPL17P18621 184 aaKnown RBP13.49□□□□□ -0.25
PRIM1-201ENST00000338193 FGFR3P22607 806 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 PPM1AP35813 382 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 AP3M2P53677 418 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 TRPC3Q13507 836 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 SOWAHAQ2M3V2 549 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 ZNF699Q32M78 642 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 KBTBD7Q8WVZ9 684 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 LPIN3Q9BQK8 851 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
PRIM1-201ENST00000338193 C11orf84Q9BUA3 381 aaPredicted RBP13.49□□□□□ -0.25
PRIM1-201ENST00000338193 INTS2Q9H0H0 1204 aaKnown RBP13.49□□□□□ -0.25
PRIM1-201ENST00000338193 CHST7Q9NS84 486 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
PRIM1-201ENST00000338193 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
PRIM1-201ENST00000338193 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.254e-7■■■■■ 66.5
PRIM1-201ENST00000338193 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
PRIM1-201ENST00000338193 CYB561D2O14569 222 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 EPHB6O15197 1021 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 LILRB3O75022 631 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 SOD2P04179 222 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 CDK11BP21127 795 aaKnown RBP13.48□□□□□ -0.25
PRIM1-201ENST00000338193 ASPAP45381 313 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 NOP14P78316 857 aaKnown RBP13.48□□□□□ -0.25
PRIM1-201ENST00000338193 FANCCQ00597 558 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 SV2CQ496J9 727 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 KIAA0319Q5VV43 1072 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 DSTYKQ6XUX3 929 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 FEZF2Q8TBJ5 459 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 ZNF560Q96MR9 790 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 GCNT4Q9P109 453 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 RWDD3Q9Y3V2 267 aa13.48□□□□□ -0.25
PRIM1-201ENST00000338193 LRRC10BA6NIK2 292 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 LGALS16A8MUM7 142 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 PMM2O15305 246 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 STX10O60499 249 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 STAU1O95793 577 aaKnown RBP13.47□□□□□ -0.25
PRIM1-201ENST00000338193 CALCAP01258 141 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 WEE2P0C1S8 567 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 OR4Q2P0C623 313 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 LMO2P25791 158 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 PON1P27169 355 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRIM1-201ENST00000338193 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
PRIM1-201ENST00000338193 ORC1Q13415 861 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
PRIM1-201ENST00000338193 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms