RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 A0A087X0T9 212 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF263O14978 683 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 HOXA2O43364 376 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 LCA5LO95447 670 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 FAM228BP0C875 321 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 GATMP50440 423 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 PDE6CP51160 858 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 GFPT1Q06210 699 aaPredicted RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 INCA1Q0VD86 236 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 SLC18A3Q16572 532 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 LIMS2Q7Z4I7 341 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF280BQ86YH2 543 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 ABI1Q8IZP0 508 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 CCAR2Q8N163 923 aaKnown RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 RABGGTAQ92696 567 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 CASD1Q96PB1 797 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 MMS19Q96T76 1030 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 KCND1Q9NSA2 647 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 KANSL3Q9P2N6 904 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 HMGXB4Q9UGU5 601 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
TRIM49B-201ENST00000332682 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 CILPO75339 1184 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 DDHD2O94830 711 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 CALCAP01258 141 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 CCDC175P0C221 793 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 ACRP10323 421 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 SOWAHAQ2M3V2 549 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 VPS36Q86VN1 386 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 DDX1Q92499 740 aaKnown RBP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 UROC1Q96N76 676 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 NENFQ9UMX5 172 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 TSC2P49815 1807 aa12.91□□□□□ -0.34
TRIM49B-201ENST00000332682 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 EFCAB14O75071 495 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 CHRNB2P17787 502 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 BPIFB4P59827 614 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 CDR2Q01850 454 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF394Q53GI3 561 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 TAF3Q5VWG9 929 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 PALB2Q86YC2 1186 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 SLC30A5Q8TAD4 765 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 KBTBD7Q8WVZ9 684 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 BADQ92934 168 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 ABHD8Q96I13 439 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 TWNKQ96RR1 684 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 BARX2Q9UMQ3 279 aaPredicted RBP12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
TRIM49B-201ENST00000332682 TACC1O75410 805 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 B3GAT3O94766 335 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 KIF4AO95239 1232 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 MMEP08473 750 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 GNA15P30679 374 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 NDST1P52848 882 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 RAD23BP54727 409 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 WDR5P61964 334 aaKnown RBP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 DEFB103AP81534 67 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 FMO1Q01740 532 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 RNASELQ05823 741 aaKnown RBP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 FPGSQ05932 587 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 SPA17Q15506 151 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 C16orf59Q7L2K0 433 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 TOP6BLQ8N6T0 577 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 APPL2Q8NEU8 664 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 HTATIP2Q9BUP3 242 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 MRPL9Q9BYD2 267 aaKnown RBP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 DNAJB4Q9UDY4 337 aa12.89□□□□□ -0.35
TRIM49B-201ENST00000332682 NAGPAQ9UK23 515 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms