RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CSDE1O75534 798 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 TMEM191BP0C7N4 346 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 VPS41P49754 854 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 KLF1Q13351 362 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 NLRP14Q86W24 1093 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 C2orf40Q9H1Z8 148 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 PTPRHQ9HD43 1115 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 RIPK2O43353 540 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 IQCF3P0C7M6 154 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 RARGP13631 454 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 PROZP22891 400 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 SLCO1A2P46721 670 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 IGBP1P78318 339 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 PPIL2Q13356 520 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 SLMAPQ14BN4 828 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 SGSM1Q2NKQ1 1148 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 ZNF699Q32M78 642 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 GPAT2Q6NUI2 795 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 TSHZ1Q6ZSZ6 1077 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 MYCBPAPQ8TBZ2 947 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 MDM1Q8TC05 714 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 EPS8L3Q8TE67 593 aaKnown RBP15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 TFAP2BQ92481 460 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 PPP1R16BQ96T49 567 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 AAASQ9NRG9 546 aa15.77■□□□□ 0.12
CLCNKA-201ENST00000331433 PI4K2BG5E9Z4 385 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 ACKR2O00590 384 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 CXCL8P10145 99 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 CHKAP35790 457 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 ASPAP45381 313 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 ZNF252P-AS1Q0IIN9 211 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 KATNAL2Q8IYT4 538 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 ZNF473Q8WTR7 871 aaKnown RBP15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 MAIP1Q8WWC4 291 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 MCEEQ96PE7 176 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 XYLT2Q9H1B5 865 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 FZD8Q9H461 694 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 SMARCAD1Q9H4L7 1026 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 EFCC1Q9HA90 598 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 NXF1Q9UBU9 619 aaKnown RBP15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 FAM169AQ9Y6X4 670 aa15.77■□□□□ 0.11
CLCNKA-201ENST00000331433 IVDP26440 423 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 CORO7P57737 925 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 ADCY2Q08462 1091 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 PTK6Q13882 451 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 DDX23Q9BUQ8 820 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 WHRNQ9P202 907 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 FEZ2Q9UHY8 353 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 POLIQ9UNA4 740 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 GAS8O95995 478 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 KRT19P08727 400 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 CYP2C8P10632 490 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 OSBPP22059 807 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 RAP1GAPP47736 663 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 IFI35P80217 286 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 MBTD1Q05BQ5 628 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 ZFYVE27Q5T4F4 411 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 CYP4A22Q5TCH4 519 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 EXOC8Q8IYI6 725 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 WDTC1Q8N5D0 677 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 ATL2Q8NHH9 583 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 SNF8Q96H20 258 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 CDT1Q9H211 546 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 IP6K2Q9UHH9 426 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 ANK1P16157 1881 aa15.76■□□□□ 0.11
CLCNKA-201ENST00000331433 F8VP50 259 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 KRT10P13645 584 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ITGA8P53708 1063 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 OGDHQ02218 1023 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 BYSLQ13895 437 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 TFDP1Q14186 410 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 TTLL4Q14679 1199 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 KAZNQ674X7 775 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 DNAJC24Q6P3W2 148 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 PRUNE1Q86TP1 453 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 EXD1Q8NHP7 514 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 GRK7Q8WTQ7 553 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 PGM2Q96G03 612 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 PWWP2AQ96N64 755 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 CDC42EP4Q9H3Q1 356 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 TCRBV5S1A1TA0A578 114 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 RGS16O15492 202 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 HBP1O60381 514 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ACSL3O95573 720 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 TNNC2P02585 160 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 CALB1P05937 261 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 MAN1A1P33908 653 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ADCY8P40145 1251 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 ORC1Q13415 861 aa15.75■□□□□ 0.11
CLCNKA-201ENST00000331433 SURF1Q15526 300 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms