RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RAD23BP54727 409 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 YWHAEP62258 255 aaKnown RBP18.05■□□□□ 0.48
DDX41-201ENST00000330503 TRIM32Q13049 653 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 MAMLD1Q13495 774 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 LIN9Q5TKA1 542 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 PLEKHA7Q6IQ23 1121 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 NT5DC4Q86YG4 428 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 CD302Q8IX05 232 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 HPDLQ96IR7 371 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 ZMAT2Q96NC0 199 aaKnown RBP18.05■□□□□ 0.48
DDX41-201ENST00000330503 UBXN6Q9BZV1 441 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 PLEKHA4Q9H4M7 779 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 PLEKHA5Q9HAU0 1116 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 GDF3Q9NR23 364 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 PCDHGC3Q9UN70 934 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 HES2Q9Y543 173 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 CITO14578 2027 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 C6orf222P0C671 652 aaPredicted RBP18.05■□□□□ 0.48
DDX41-201ENST00000330503 MMP8P22894 467 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 CTNNA1P35221 906 aaKnown RBP18.05■□□□□ 0.48
DDX41-201ENST00000330503 RBP5P82980 135 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 NOTUMQ6P988 496 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 ALKAL1Q6UXT8 129 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 KRT222Q8N1A0 295 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 C7orf31Q8N865 590 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 SMC1BQ8NDV3 1235 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 AENQ8WTP8 325 aaKnown RBP18.05■□□□□ 0.48
DDX41-201ENST00000330503 KIF12Q96FN5 646 aa18.05■□□□□ 0.48
DDX41-201ENST00000330503 TRIP11Q15643 1979 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 ZSCAN5CA6NGD5 496 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 CCDC188H7C350 402 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 SART1O43290 800 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 SPOPO43791 374 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 LSM8O95777 96 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 TNFRSF8P28908 595 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 CDH5P33151 784 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 CASP8Q14790 479 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 ZBTB6Q15916 424 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 GNASQ5JWF2 1037 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 SNX27Q96L92 541 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 TWNKQ96RR1 684 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 ELOVL4Q9GZR5 314 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 DDX47Q9H0S4 455 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 BHMG1C9JSJ3 638 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 KPNA6O60684 536 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 HEXIM1O94992 359 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 STAU1O95793 577 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 PYGMP11217 842 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 AXLP30530 894 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 CRYBB1P53674 252 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 UBXN11Q5T124 520 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 PPP1R2P3Q6NXS1 205 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 PAXIP1Q6ZW49 1069 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 APBB1IPQ7Z5R6 666 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 NME8Q8N427 588 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 SLC4A11Q8NBS3 891 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 CYP3A43Q9HB55 503 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 GPBP1L1Q9HC44 474 aaPredicted RBP18.04■□□□□ 0.48
DDX41-201ENST00000330503 HMGXB4Q9UGU5 601 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 DERAQ9Y315 318 aa18.04■□□□□ 0.48
DDX41-201ENST00000330503 CILPO75339 1184 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 GJB6O95452 261 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 PGK1P00558 417 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 PAEPP09466 180 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 GNAT1P11488 350 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 GUCY2DQ02846 1103 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 PRKCZQ05513 592 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 ORC1Q13415 861 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 TRADDQ15628 312 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 MAP9Q49MG5 647 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 DENND1BQ6P3S1 775 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 TMEM35BQ8NCS4 154 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 MTG1Q9BT17 334 aaPredicted RBP18.03■□□□□ 0.48
DDX41-201ENST00000330503 ZNF518BQ9C0D4 1074 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
DDX41-201ENST00000330503 TCRBV5S1A1TA0A578 114 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 CCDC66A2RUB6 948 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 MYO1FO00160 1098 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 AOC2O75106 756 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 ALDH1A1P00352 501 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 IFT20Q8IY31 132 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 ZDHHC14Q8IZN3 488 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 CASKIN2Q8WXE0 1202 aa18.02■□□□□ 0.48
DDX41-201ENST00000330503 NXF3Q9H4D5 531 aaKnown RBP18.02■□□□□ 0.48
DDX41-201ENST00000330503 PROSCO94903 275 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 CARSP49589 748 aaKnown RBP18.02■□□□□ 0.47
DDX41-201ENST00000330503 CACNB2Q08289 660 aaPredicted RBP18.02■□□□□ 0.47
DDX41-201ENST00000330503 NBPF20Q3BBV1 942 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 CXCL17Q6UXB2 119 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.47
DDX41-201ENST00000330503 GDAP1L1Q96MZ0 367 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 RNF39Q9H2S5 420 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 MRPL47Q9HD33 250 aaKnown RBP18.02■□□□□ 0.47
DDX41-201ENST00000330503 ERVK-5Q9HDB9 667 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 RNF19AQ9NV58 838 aa18.02■□□□□ 0.47
DDX41-201ENST00000330503 ESYT3A0FGR9 886 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms