RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SCINQ9Y6U3 715 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 A0A0G2JND7 137 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 TJP3O95049 919 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 MAP3K6O95382 1288 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 WNT7BP56706 349 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 GCNT1Q02742 428 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 CAV1Q03135 178 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 SPARCL1Q14515 664 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 CYP1B1Q16678 543 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 PYROXD1Q8WU10 500 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 DDX1Q92499 740 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 CFAP73A6NFT4 308 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 STAM2O75886 525 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 PSMA2P25787 234 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 SMAD1Q15797 465 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 RHPN2Q8IUC4 686 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 CKAP2Q8WWK9 683 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 HSPH1Q92598 858 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 LRRC37BQ96QE4 947 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 SENP7Q9BQF6 1050 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 NPHS2Q9NP85 383 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 PARVAQ9NVD7 372 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 EXTL3O43909 919 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 TMEM191BP0C7N4 346 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 FKBP1AP62942 108 aaKnown RBP13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 MAMLD1Q13495 774 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 GBP7Q8N8V2 638 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 NUB1Q9Y5A7 615 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 MYBL1P10243 752 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 SSTR1P30872 391 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 PEX19P40855 299 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 CCDC6Q16204 474 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 CCNG2Q16589 344 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 CDO1Q16878 200 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 GPAT2Q6NUI2 795 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 CENPUQ71F23 418 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 EMC1Q8N766 993 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 MYPNQ86TC9 1320 aa13.62□□□□□ -0.23
HMGCS1-201ENST00000325110 MTA2O94776 668 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 EGFRP00533 1210 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 MSH2P43246 934 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 RFX6Q8HWS3 928 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 ABRAQ8N0Z2 381 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 ZNF606Q8WXB4 792 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 RBM41Q96IZ5 413 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 IQCGQ9H095 443 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 XPNPEP1Q9NQW7 623 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 PHTF1Q9UMS5 762 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 PTPRJQ12913 1337 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 NEBLO76041 1014 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 KRT4P19013 534 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 LMNB2Q03252 620 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 CXCL9Q07325 125 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 TXNRD3NBQ6F5E7 133 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 IP6K2Q9UHH9 426 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 GSTA1P08263 222 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 FDX1P10109 184 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 FOXN2P32314 431 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 NOMO3P69849 1222 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 CENPCQ03188 943 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 FYB2Q5VWT5 728 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 SCYL2Q6P3W7 929 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 LVRNQ6Q4G3 990 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 LPAR1Q92633 364 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 NLRP4Q96MN2 994 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 INO80BQ9C086 356 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 SLC24A3Q9HC58 644 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 ZNF302Q9NR11 478 aa13.61□□□□□ -0.23
HMGCS1-201ENST00000325110 CBX6O95503 412 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 PCK1P35558 622 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 HIF1AQ16665 826 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 ZACNQ401N2 412 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 LRRC71Q8N4P6 559 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 GEMIN8Q9NWZ8 242 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 A0A1W2PPM1 405 aa13.6□□□□□ -0.23
HMGCS1-201ENST00000325110 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms