RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 STAT5BP51692 787 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 GLIPR1L2Q4G1C9 344 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 TWF2Q6IBS0 349 aaKnown RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 BLOC1S2Q6QNY1 142 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 DHX32Q7L7V1 743 aaKnown RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 LNX1Q8TBB1 728 aaPredicted RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 MMS19Q96T76 1030 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 MTMR7Q9Y216 660 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 MYLKQ15746 1914 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 ICE1Q9Y2F5 2266 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 NRG2O14511 850 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 GPAA1O43292 621 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PCDHGA12O60330 932 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 SFPQP23246 707 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 TOB2Q14106 344 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 NOLC1Q14978 699 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 FAM160B1Q5W0V3 765 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 MB21D2Q8IYB1 491 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 DCBLD1Q8N8Z6 715 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 USP33Q8TEY7 942 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 FOXJ1Q92949 421 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 POLR3BQ9NW08 1133 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 BACE2Q9Y5Z0 518 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 NFASCO94856 1347 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 FGF19O95750 216 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 DRD2P14416 443 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 TMOD1P28289 359 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 MRPS21P82921 87 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 SKOR1P84550 965 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 IMMTQ16891 758 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 DDX27Q96GQ7 796 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PRIMPOLQ96LW4 560 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 GAREM1Q9H706 876 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 CNNM2Q9H8M5 875 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 IPO5O00410 1097 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 ENC1O14682 589 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 MAFGO15525 162 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PFKFB2O60825 505 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 VTNP04004 478 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 GLDCP23378 1020 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 NLRP11P59045 1033 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 NFKBIBQ15653 356 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 ADCK5Q3MIX3 580 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 IQCEQ6IPM2 695 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 BPIFB1Q8TDL5 484 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 MTMR9Q96QG7 549 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 INO80BQ9C086 356 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 PUS7LQ9H0K6 701 aaKnown RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 THSD1Q9NS62 852 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 MTRRQ9UBK8 725 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 TUBD1Q9UJT1 453 aa7.37□□□□□ -1.23
CSTF3-201ENST00000323959 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSTF3-201ENST00000323959 E7EWF7 191 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 ORC4O43929 436 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 RUNX3Q13761 415 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 CRY1Q16526 586 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 SKOR2Q2VWA4 1001 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 KANSL1Q7Z3B3 1105 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 SGMS1Q86VZ5 419 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 CD101Q93033 1021 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 JAKMIP1Q96N16 626 aaKnown RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 GBP4Q96PP9 640 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 GCOM2Q9BZD3 368 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 NACAP1Q9BZK3 213 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 ZMYM5Q9UJ78 669 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 CEP131Q9UPN4 1083 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 EVPLQ92817 2033 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 CCR2P41597 374 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 MLLT3P42568 568 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 GALK1P51570 392 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 GPC3P51654 580 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 USP49Q70CQ1 688 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 TTC8Q8TAM2 541 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 NAF1Q96HR8 494 aaKnown RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 ASAH2Q9NR71 780 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 PCDHB2Q9Y5E7 798 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 SPG11Q96JI7 2443 aa7.36□□□□□ -1.23
CSTF3-201ENST00000323959 TDRD15B5MCY1 1934 aaKnown RBP7.36□□□□□ -1.23
CSTF3-201ENST00000323959 IGKV6D-21A0A0A0MT36 114 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 FGAP02671 866 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 LIFRP42702 1097 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 LSSP48449 732 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ASPRV1Q53RT3 343 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 TCEAL8Q8IYN2 117 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 GTF3C6Q969F1 213 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms