RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 LMAN1LQ9HAT1 526 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 LARSQ9P2J5 1176 aaKnown RBP15.47■□□□□ 0.07
RPP40-201ENST00000319533 HSFX1Q9UBD0 423 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 ODF2LQ9ULJ1 636 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 NDRG2Q9UN36 371 aaKnown RBP15.47■□□□□ 0.07
RPP40-201ENST00000319533 PIAS3Q9Y6X2 628 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 LACTBL1A8MY62 500 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 PRR5-ARHGAP8B1AHC4 643 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 CHADO15335 359 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 CD2BP2O95400 341 aaKnown RBP15.46■□□□□ 0.07
RPP40-201ENST00000319533 TNFSF9P41273 254 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 CCR3P51677 355 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 ARHGAP8P85298 464 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 SPAG1Q07617 926 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 ENOX2Q16206 610 aaKnown RBP15.46■□□□□ 0.07
RPP40-201ENST00000319533 SPATA1Q5VX52 437 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 CENPPQ6IPU0 288 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 C1orf228Q6PIY5 440 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 HAUS6Q7Z4H7 955 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 RSPRY1Q96DX4 576 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 ASB3Q9Y575 518 aa15.46■□□□□ 0.07
RPP40-201ENST00000319533 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.46■□□□□ 0.07
RPP40-201ENST00000319533 TIMM13Q9Y5L4 95 aaPredicted RBP15.46■□□□□ 0.07
RPP40-201ENST00000319533 NPHP3-ACAD11A0A0J9YXS1 232 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 OGTO15294 1046 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 XPOTO43592 962 aaKnown RBP15.45■□□□□ 0.06
RPP40-201ENST00000319533 PAPSS2O95340 614 aaPredicted RBP15.45■□□□□ 0.06
RPP40-201ENST00000319533 OR4Q2P0C623 313 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 WEE1P30291 646 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 ZNF131P52739 623 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 EPHB3P54753 998 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 LILRA4P59901 499 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 LMNB2Q03252 620 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 DUSP4Q13115 394 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 PPP2R5DQ14738 602 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 ZRSR1Q15695 479 aaKnown RBP15.45■□□□□ 0.06
RPP40-201ENST00000319533 CD302Q8IX05 232 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 CELF5Q8N6W0 485 aaKnown RBP15.45■□□□□ 0.06
RPP40-201ENST00000319533 AK8Q96MA6 479 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 PLIN2Q99541 437 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 MKNK1Q9BUB5 465 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 C8orf33Q9H7E9 229 aaPredicted RBP15.45■□□□□ 0.06
RPP40-201ENST00000319533 TBX20Q9UMR3 447 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 SMC3Q9UQE7 1217 aa15.45■□□□□ 0.06
RPP40-201ENST00000319533 A0A0B4J269 797 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 A0A1W2PRU2 124 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 MTMR11A4FU01 709 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 VWA3AA6NCI4 1184 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 H3BQV1 296 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 PPEF2O14830 753 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 CYP11A1P05108 521 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 CCNE1P24864 410 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 LIG4P49917 911 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 GUCY2FP51841 1108 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 ATXN1P54253 815 aaKnown RBP15.44■□□□□ 0.06
RPP40-201ENST00000319533 GAS6Q14393 721 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 OVOS1Q6IE37 1185 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 DSTYKQ6XUX3 929 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 USP37Q86T82 979 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 SPEM1Q8N4L4 309 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 PSMG2Q969U7 264 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 BICD1Q96G01 975 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 CDK5RAP3Q96JB5 506 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 REEP2Q9BRK0 252 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 RPF1Q9H9Y2 349 aaKnown RBP15.44■□□□□ 0.06
RPP40-201ENST00000319533 PARD6AQ9NPB6 346 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 OBP2AQ9NY56 170 aa15.44■□□□□ 0.06
RPP40-201ENST00000319533 CPSF3Q9UKF6 684 aaKnown RBP15.44■□□□□ 0.06
RPP40-201ENST00000319533 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 PIRO00625 290 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 FGF19O95750 216 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 GJB2P29033 226 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 MATR3P43243 847 aaKnown RBP eCLIP15.43■□□□□ 0.06
RPP40-201ENST00000319533 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 CXCL12P48061 93 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 VASPP50552 380 aaPredicted RBP15.43■□□□□ 0.06
RPP40-201ENST00000319533 WDR44Q5JSH3 913 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 MCTP1Q6DN14 999 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 LAIR1Q6GTX8 287 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 GAREM2Q75VX8 874 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 DNAJB7Q7Z6W7 309 aaPredicted RBP15.43■□□□□ 0.06
RPP40-201ENST00000319533 ARID3BQ8IVW6 561 aaPredicted RBP15.43■□□□□ 0.06
RPP40-201ENST00000319533 YAF2Q8IY57 180 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 ATAD1Q8NBU5 361 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 LRRC15Q8TF66 581 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 SENP8Q96LD8 212 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 LRRC3BQ96PB8 259 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 FIZ1Q96SL8 496 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 SLITRK6Q9H5Y7 841 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 BLOC1S4Q9NUP1 217 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 GMEB2Q9UKD1 530 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 DERAQ9Y315 318 aa15.43■□□□□ 0.06
RPP40-201ENST00000319533 ANO9A1A5B4 782 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 HNRNPDLO14979 420 aaKnown RBP15.42■□□□□ 0.06
RPP40-201ENST00000319533 LRP3O75074 770 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 ABCD1P33897 745 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms