RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 MRPL47Q9HD33 250 aaKnown RBP21.88■■□□□ 1.09
TTC39C-202ENST00000317571 DNAJC17Q9NVM6 304 aaKnown RBP21.88■■□□□ 1.09
TTC39C-202ENST00000317571 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.88■■□□□ 1.09
TTC39C-202ENST00000317571 EVPLQ92817 2033 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 IQCF3P0C7M6 154 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 LIG3P49916 1009 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 BYSLQ13895 437 aaKnown RBP21.88■■□□□ 1.09
TTC39C-202ENST00000317571 SLMAPQ14BN4 828 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 MAPK6Q16659 721 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 TNFAIP8L3Q5GJ75 292 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 TXNRD3NBQ6F5E7 133 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 THNSL1Q8IYQ7 743 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 DCPSQ96C86 337 aaKnown RBP21.88■■□□□ 1.09
TTC39C-202ENST00000317571 OSBPL8Q9BZF1 889 aa21.88■■□□□ 1.09
TTC39C-202ENST00000317571 TMEM191CA6NGB0 347 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 PI4K2BG5E9Z4 385 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 MEFVO15553 781 aaPredicted RBP21.87■■□□□ 1.09
TTC39C-202ENST00000317571 TMEM191BP0C7N4 346 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 ASPAP45381 313 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 VPS41P49754 854 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 CLCN3P51790 818 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 ITGA8P53708 1063 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 PDE4CQ08493 712 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 CALCOCO2Q13137 446 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.87■■□□□ 1.09
TTC39C-202ENST00000317571 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.87■■□□□ 1.09
TTC39C-202ENST00000317571 TMEM109Q9BVC6 243 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 IMPG2Q9BZV3 1241 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 NIF3L1Q9GZT8 377 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 SCINQ9Y6U3 715 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 GMNCA6NCL1 334 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 TFAMQ00059 246 aaKnown RBP21.87■■□□□ 1.09
TTC39C-202ENST00000317571 AUHQ13825 339 aaKnown RBP21.87■■□□□ 1.09
TTC39C-202ENST00000317571 ERO1BQ86YB8 467 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 CCDC114Q96M63 670 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 NLRP4Q96MN2 994 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 SPATA33Q96N06 139 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 PARVAQ9NVD7 372 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 AGTPBP1Q9UPW5 1226 aa21.87■■□□□ 1.09
TTC39C-202ENST00000317571 SPDYE5A6NIY4 337 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 NOP56O00567 594 aaKnown RBP21.86■■□□□ 1.09
TTC39C-202ENST00000317571 MMP13P45452 471 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 MXD4Q14582 209 aaPredicted RBP21.86■■□□□ 1.09
TTC39C-202ENST00000317571 PLPPR4Q7Z2D5 763 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 SNF8Q96H20 258 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 POLIQ9UNA4 740 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 F8VP50 259 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 KRT10P13645 584 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 SSR1P43307 286 aaKnown RBP21.86■■□□□ 1.09
TTC39C-202ENST00000317571 IREB2P48200 963 aaKnown RBP21.86■■□□□ 1.09
TTC39C-202ENST00000317571 AP3M2P53677 418 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 DUOXA2Q1HG44 320 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 GPAT2Q6NUI2 795 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 TSHZ1Q6ZSZ6 1077 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 ZBTB8OSQ8IWT0 167 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 EXD1Q8NHP7 514 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 TCP11Q8WWU5 503 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 MCEEQ96PE7 176 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 FZD8Q9H461 694 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 TJP2Q9UDY2 1190 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 KCNH4Q9UQ05 1017 aa21.86■■□□□ 1.09
TTC39C-202ENST00000317571 ACSL3O95573 720 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 CHN1P15882 459 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 MAN1A1P33908 653 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 PPP1R15BQ5SWA1 713 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 MPZL3Q6UWV2 235 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 GLIS1Q8NBF1 620 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ATL2Q8NHH9 583 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ACSF2Q96CM8 615 aaPredicted RBP21.85■■□□□ 1.09
TTC39C-202ENST00000317571 RGS16O15492 202 aaPredicted RBP21.85■■□□□ 1.09
TTC39C-202ENST00000317571 SLC25A27O95847 323 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ITIH2P19823 946 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 RAP1GAPP47736 663 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 CCNG2Q16589 344 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 GJC2Q5T442 439 aaPredicted RBP21.85■■□□□ 1.09
TTC39C-202ENST00000317571 CYP4A22Q5TCH4 519 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ATF7IP2Q5U623 682 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 B4GALNT4Q76KP1 1039 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 MAIP1Q8WWC4 291 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ATXN2LQ8WWM7 1075 aaKnown RBP21.85■■□□□ 1.09
TTC39C-202ENST00000317571 FAM129AQ9BZQ8 928 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 RNPEPQ9H4A4 650 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 PPME1Q9Y570 386 aa21.85■■□□□ 1.09
TTC39C-202ENST00000317571 ACKR2O00590 384 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 CXCL11O14625 94 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 CSDE1O75534 798 aaKnown RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 POTEJP0CG39 1038 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 MBTD1Q05BQ5 628 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 LONRF1Q17RB8 773 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 SGSM1Q2NKQ1 1148 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 CCDC38Q502W7 563 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 ERMARDQ5T6L9 678 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 MFSD7Q6UXD7 560 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 DHX37Q8IY37 1157 aaKnown RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 MMP19Q99542 508 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 EFCC1Q9HA90 598 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 CYTH4Q9UIA0 394 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 IVNS1ABPQ9Y6Y0 642 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 INO80B-WBP1J3KQ70 363 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms