RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 KRT13P13646 458 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 POU3F3P20264 500 aaPredicted RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 FGFR3P22607 806 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 PPP1R2P41236 205 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 GCLMP48507 274 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TAF6P49848 677 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 LILRA4P59901 499 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 RBP5P82980 135 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 DSG1Q02413 1049 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 PPP3CAQ08209 521 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 NFKBIBQ15653 356 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 PSMD5Q16401 504 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 KLHL40Q2TBA0 621 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 DCAF17Q5H9S7 520 aaPredicted RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TCERG1LQ5VWI1 586 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TDRD10Q5VZ19 366 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 SASS6Q6UVJ0 657 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 NT5DC4Q86YG4 428 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 ZC3H3Q8IXZ2 948 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 MRPL43Q8N983 215 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 CXorf38Q8TB03 319 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 KLHL5Q96PQ7 755 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 NGRNQ9NPE2 291 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 LMCD1Q9NZU5 365 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 RWDD2AQ9UIY3 292 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TSR3Q9UJK0 312 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 ITGA11Q9UKX5 1188 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TRANK1O15050 2925 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 SYCE3A1L190 88 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CYB561D2O14569 222 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 SLC16A3O15427 465 aaKnown RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 TEX28O15482 410 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 TRAPPC3O43617 180 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 LILRB3O75022 631 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CLASP2O75122 1294 aaKnown RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 VNN1O95497 513 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 SPATA31D3P0C874 917 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 ARPP19P56211 112 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 MYL6P60660 151 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 TYRO3Q06418 890 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 ELAVL2Q12926 359 aaKnown RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 TRPC3Q13507 836 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CLUL1Q15846 466 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 TPD52L1Q16890 204 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 SPATA31D4Q6ZUB0 917 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 INTS8Q75QN2 995 aaKnown RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 PALB2Q86YC2 1186 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 VN1R2Q8NFZ6 395 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 LNX1Q8TBB1 728 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 TMEM174Q8WUU8 243 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 SYAP1Q96A49 352 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 BORCS6Q96GS4 357 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 HPDLQ96IR7 371 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 SUSD3Q96L08 255 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 SENP8Q96LD8 212 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 ZNF560Q96MR9 790 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CEP63Q96MT8 703 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 APOL5Q9BWW9 433 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 DNAJC25Q9H1X3 360 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CHST7Q9NS84 486 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 CLDND1Q9NY35 253 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 ARMCX3Q9UH62 379 aaPredicted RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 POLIQ9UNA4 740 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.05
CDC42-201ENST00000315554 SNX9Q9Y5X1 595 aa8.46□□□□□ -1.05
CDC42-201ENST00000315554 KPNA7A9QM74 516 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 M0QZQ0 153 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 MAPK13O15264 365 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 HCRTO43612 131 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 HLA-DRAP01903 254 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 C4BPAP04003 597 aaKnown RBP8.45□□□□□ -1.06
CDC42-201ENST00000315554 OR4Q2P0C623 313 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 EPCAMP16422 314 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 PTMSP20962 102 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 KLRC2P26717 231 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 PIK3CAP42336 1068 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 AARSP49588 968 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDC42-201ENST00000315554 DLX2Q07687 328 aaPredicted RBP8.45□□□□□ -1.06
CDC42-201ENST00000315554 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
CDC42-201ENST00000315554 STX1AQ16623 288 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 DUSP6Q16828 381 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 SV2CQ496J9 727 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 CTXN3Q4LDR2 81 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 WSCD1Q658N2 575 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 SPOPLQ6IQ16 392 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
CDC42-201ENST00000315554 SCARA5Q6ZMJ2 495 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 SV2AQ7L0J3 742 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 FILIP1Q7Z7B0 1213 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 FEZF2Q8TBJ5 459 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 CNOT6LQ96LI5 555 aaKnown RBP8.45□□□□□ -1.06
CDC42-201ENST00000315554 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 CLSTN3Q9BQT9 956 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 PI4K2AQ9BTU6 479 aa8.45□□□□□ -1.06
CDC42-201ENST00000315554 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms