RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 ALG3Q92685 438 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 CD101Q93033 1021 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 VCPIP1Q96JH7 1222 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 TMEM59LQ9UK28 342 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
TARDBP-202ENST00000315091 GRIN2DO15399 1336 aa13.4□□□□□ -0.26
TARDBP-202ENST00000315091 CILPO75339 1184 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 HMGCRP04035 888 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TUBBP07437 444 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 PAEPP09466 180 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 COMTP21964 271 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 AKAP5P24588 427 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 VSNL1P62760 191 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 MESDQ14696 234 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 BRD3Q15059 726 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 C2CD6Q53TS8 623 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 BTBD6Q96KE9 485 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 C11orf70Q9BRQ4 267 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 SELENOOQ9BVL4 669 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CITO14578 2027 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CEP104O60308 925 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.275e-13■□□□□ 10.2
TARDBP-202ENST00000315091 CHRNA1P02708 482 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 MMP8P22894 467 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 HOXD10P28358 340 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 INCA1Q0VD86 236 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 PLEKHA7Q6IQ23 1121 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 LLGL2Q6P1M3 1020 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 HNRNPLLQ8WVV9 542 aaKnown RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■□□□□ 10.9
TARDBP-202ENST00000315091 LRRC1Q9BTT6 524 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CARD9Q9H257 536 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-202ENST00000315091 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
TARDBP-202ENST00000315091 CENPFP49454 3210 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 PGRMC1O00264 195 aaKnown RBP13.38□□□□□ -0.27
TARDBP-202ENST00000315091 PPEF2O14830 753 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 P4HA1P13674 534 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 MAP2K2P36507 400 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 PEX5P50542 639 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 MGAT3Q09327 533 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 MAMLD1Q13495 774 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 FAM47CQ5HY64 1035 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 GLRA4Q5JXX5 417 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 KRT35Q92764 455 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
TARDBP-202ENST00000315091 IPPQ9Y573 584 aa13.38□□□□□ -0.27
TARDBP-202ENST00000315091 RALGAPA2Q2PPJ7 1873 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 TCRBV5S1A1TA0A578 114 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 M0QZ92 97 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 KCNE1P15382 129 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 MARCKSL1P49006 195 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 LIN9Q5TKA1 542 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 TMCO3Q6UWJ1 677 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 PCSK9Q8NBP7 692 aaKnown RBP13.37□□□□□ -0.27
TARDBP-202ENST00000315091 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 ARRDC4Q8NCT1 418 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
TARDBP-202ENST00000315091 BEST2Q8NFU1 509 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 PXYLP1Q8TE99 480 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 HDAC7Q8WUI4 952 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 APOL6Q9BWW8 343 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 WNT8AQ9H1J5 351 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 RNF19AQ9NV58 838 aa13.37□□□□□ -0.27
TARDBP-202ENST00000315091 ANAPC7Q9UJX3 599 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms