RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 KRT6BP04259 564 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 KRT6CP48668 564 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SERPINH1P50454 418 aaKnown RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 POTEEQ6S8J3 1075 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 NSL1Q96IY1 281 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 ELMO2Q96JJ3 720 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 GOLPH3Q9H4A6 298 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 CD4P01730 458 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SLC2A3P11169 496 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SGSM1Q2NKQ1 1148 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 TINF2Q9BSI4 451 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 ITIH6Q6UXX5 1313 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PNMA8CA0A1B0GUJ8 204 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 CYP4Z2PQ8N1L4 340 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SERPINB12Q96P63 405 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 STN1Q9H668 368 aaKnown RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 DOLKQ9UPQ8 538 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SOAT2O75908 522 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PGK2P07205 417 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SNRPAP09012 282 aaKnown RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 ACTN3Q08043 901 aaPredicted RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 TRIP10Q15642 601 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SFR1Q86XK3 245 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 VCLP18206 1134 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SDE2Q6IQ49 451 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 MAGED4Q96JG8 741 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SPON2Q9BUD6 331 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 BARHL2Q9NY43 387 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PCSK1NQ9UHG2 260 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 NEU2Q9Y3R4 380 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PDXKO00764 312 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 AGAP9Q5VTM2 703 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 SNX30Q5VWJ9 437 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 KATNAL1Q9BW62 490 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 TM9SF1O15321 606 aa16.14■□□□□ 0.18
HCFC1-201ENST00000310441 POU4F1Q01851 419 aa16.14■□□□□ 0.18
HCFC1-201ENST00000310441 PTK7Q13308 1070 aa16.14■□□□□ 0.18
HCFC1-201ENST00000310441 TMCC3Q9ULS5 477 aa16.14■□□□□ 0.18
HCFC1-201ENST00000310441 CAND2O75155 1236 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 PSMC3P17980 439 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ZFYVE1Q9HBF4 777 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 KCNH4Q9UQ05 1017 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 FHOD1Q9Y613 1164 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SLC18A3Q16572 532 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 KLHL12Q53G59 568 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ANKS6Q68DC2 871 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF507Q8TCN5 953 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CAMKK2Q96RR4 588 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 UTYO14607 1347 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 A8MXQ7 604 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CHN1P15882 459 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 EIF3LQ9Y262 564 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 MAGEA13PA6NCF6 341 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 FCER1AP12319 257 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CENPCQ03188 943 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 APEX2Q9UBZ4 518 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ARAP3Q8WWN8 1544 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 UBE2SQ16763 222 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 PTRHD1Q6GMV3 140 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 DDX53Q86TM3 631 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SPRTNQ9H040 489 aaPredicted RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 INTS2Q9H0H0 1204 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 DDX47Q9H0S4 455 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CITO14578 2027 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ECDO95905 644 aaPredicted RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ITGA1P56199 1179 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 NFX1Q12986 1120 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF394Q53GI3 561 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
HCFC1-201ENST00000310441 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
HCFC1-201ENST00000310441 SERPIND1P05546 499 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SULT1E1P49888 294 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 ARMC3Q5W041 872 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 KRT73Q86Y46 540 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SPATA33Q96N06 139 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 MANSC1Q9H8J5 431 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SLC30A1Q9Y6M5 507 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 IL6P05231 212 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 COG2Q14746 738 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 KYNUQ16719 465 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 ATXN7L3BQ96GX2 97 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 AGPAT1Q99943 283 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms