RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ITGA7Q13683 1181 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 KIR3DS1Q14943 382 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 GPNMBQ14956 572 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PPP2R5BQ15173 497 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PTPAQ15257 358 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TERF2Q15554 542 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 FSCN1Q16658 493 aaKnown RBP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 DPCR1Q3MIW9 517 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 NT5DC1Q5TFE4 455 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 JAKMIP3Q5VZ66 844 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 ARMCX5Q6P1M9 558 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PSRC1Q6PGN9 363 aaPredicted RBP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 BNC2Q6ZN30 1099 aaPredicted RBP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 SGMS1Q86VZ5 419 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 VSTM4Q8IW00 320 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 FBXO16Q8IX29 292 aaPredicted RBP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 ANKRD35Q8N283 1001 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TMEM199Q8N511 208 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CHST13Q8NET6 341 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC34Q96HJ3 373 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CTAGE1Q96RT6 745 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 HIPK3Q9H422 1215 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CERS4Q9HA82 394 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 HOMER2Q9NSB8 354 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TRMT13Q9NUP7 481 aaKnown RBP5.44□□□□□ -1.54
CKS1B-201ENST00000308987 RNF19AQ9NV58 838 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 MTMR4Q9NYA4 1195 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 DNAI1Q9UI46 699 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CLIC4Q9Y696 253 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 MTCH2Q9Y6C9 303 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TMEM82A0PJX8 343 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 EFCAB8A8MWE9 144 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 CHURC1-FNTBB4DL54 471 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TMEM232C9JQI7 657 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 SH2B2O14492 632 aaPredicted RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 GPAA1O43292 621 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 NMT2O60551 498 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 LPXNO60711 386 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 DTNBO60941 627 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 ZBED4O75132 1171 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 SMC2O95347 1197 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 CYP2C9P11712 490 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 IFNAR1P17181 557 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 METAP2P50579 478 aaKnown RBP eCLIP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 UBASH3AP57075 661 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 PSMD2Q13200 908 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TBX2Q13207 712 aaPredicted RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TRIM29Q14134 588 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 RAB30Q15771 203 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TCTN1Q2MV58 587 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 SLFN13Q68D06 897 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 FBXO38Q6PIJ6 1188 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TRIM65Q6PJ69 517 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 KRBA2Q6ZNG9 492 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 KCTD1Q719H9 257 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 EEPD1Q7L9B9 569 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TLK2Q86UE8 772 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 MLKLQ8NB16 471 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 GMCL1P1Q8NEA9 526 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 ENOX1Q8TC92 643 aaKnown RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 MORC4Q8TE76 937 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 ALG1Q9BT22 464 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 LRFN3Q9BTN0 628 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 ASPNQ9BXN1 380 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 FOXP3Q9BZS1 431 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 SLC28A3Q9HAS3 691 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 IL17RBQ9NRM6 502 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 RNF146Q9NTX7 359 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 CYP39A1Q9NYL5 469 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 ARPP21Q9UBL0 812 aaPredicted RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 REV1Q9UBZ9 1251 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 FEM1BQ9UK73 627 aa5.43□□□□□ -1.54
CKS1B-201ENST00000308987 NAP1L2Q9ULW6 460 aaPredicted RBP5.43□□□□□ -1.54
CKS1B-201ENST00000308987 DMXL1Q9Y485 3027 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 KIAA1671Q9BY89 1806 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC196A0A1B0GTZ2 297 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 LCHNA4D1U4 455 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 KIF28PB7ZC32 967 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TLR3O15455 904 aaKnown RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ZBTB43O43298 467 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TADA3O75528 432 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TTLL1O95922 423 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 BMP15O95972 392 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TUBBP07437 444 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 CA3P07451 260 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TOP1P11387 765 aaKnown RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ALAS1P13196 640 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 GNAT2P19087 354 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 LIMS1P48059 325 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 HMGA2P52926 109 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 OAZ1P54368 228 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 PCBP3P57721 371 aaKnown RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 GUCY1B3Q02153 619 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms