RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 FGFBP2Q9BYJ0 223 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 GANQ9H2C0 597 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 VPS18Q9P253 973 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 LZTS1Q9Y250 596 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 HCFC2Q9Y5Z7 792 aa8.43□□□□□ -1.06
TM4SF1-201ENST00000305366 COL4A6Q14031 1691 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 TTC36A6NLP5 189 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 ZBTB39O15060 712 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 N4BP1O75113 896 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 ATF7P17544 494 aaPredicted RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 ANXA13P27216 316 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 PAFAH1B1P43034 410 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 PHKA2P46019 1235 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 HNRNPH2P55795 449 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 PSMC5P62195 406 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 GFPT1Q06210 699 aaPredicted RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 GIT2Q14161 759 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 SLC18A3Q16572 532 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 TDRD12Q587J7 1177 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 NOMO2Q5JPE7 1267 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 C10orf76Q5T2E6 689 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 KLHDC7AQ5VTJ3 777 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 GLB1LQ6UWU2 654 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 ANO5Q75V66 913 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 CATSPER3Q86XQ3 398 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 PRSS33Q8NF86 280 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 FEZF2Q8TBJ5 459 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 AENQ8WTP8 325 aaKnown RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 CASP10Q92851 521 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 POLR3CQ9BUI4 534 aaPredicted RBP8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 TLR10Q9BXR5 811 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 SMOC2Q9H3U7 446 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 POMKQ9H5K3 350 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 DNAJB4Q9UDY4 337 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 SALL4Q9UJQ4 1053 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 FBXL5Q9UKA1 691 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 DNM3Q9UQ16 869 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 FAN1Q9Y2M0 1017 aa8.42□□□□□ -1.06
TM4SF1-201ENST00000305366 TTC3P53804 2025 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 GRID2IPA4D2P6 1211 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 PDXKO00764 312 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 C2CD2LO14523 706 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 MAFO75444 373 aaPredicted RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 PRPF6O94906 941 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 SYF2O95926 243 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 ASGR2P07307 311 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 EPCAMP16422 314 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 ACTN2P35609 894 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 LMAN1P49257 510 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 AFF1P51825 1210 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 POLGP54098 1239 aaPredicted RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 POLR2FP61218 127 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 SIGLEC14Q08ET2 396 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 ADAM9Q13443 819 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 KCNC3Q14003 757 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 CTTNQ14247 550 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 NAB2Q15742 525 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 NFIL3Q16649 462 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 KNOP1Q1ED39 458 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 CCDC181Q5TID7 509 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 DPY19L2P1Q6NXN4 242 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 TMC5Q6UXY8 1006 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 ZNF280BQ86YH2 543 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 NELFCDQ8IXH7 590 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 FBXL6Q8N531 539 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 KREMEN2Q8NCW0 462 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 BCL7CQ8WUZ0 217 aaPredicted RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 PRPF31Q8WWY3 499 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 SELENOOQ9BVL4 669 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 INO80BQ9C086 356 aaPredicted RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 NRDE2Q9H7Z3 1164 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 METTL14Q9HCE5 456 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 CYP26B1Q9NR63 512 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 CHST12Q9NRB3 414 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 FAM105AQ9NUU6 356 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 RGL1Q9NZL6 768 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 PCDHB2Q9Y5E7 798 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 BZW2Q9Y6E2 419 aaKnown RBP8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 MUC6Q6W4X9 2439 aa8.41□□□□□ -1.06
TM4SF1-201ENST00000305366 NPHP3-ACAD11A0A0J9YXS1 232 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 C2CD4DB7Z1M9 353 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 CES2O00748 559 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 SLC16A3O15427 465 aaKnown RBP8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 CALUO43852 315 aaPredicted RBP8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 POMCP01189 267 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 KRT18P05783 430 aaKnown RBP8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 GALTP07902 379 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 MUTP22033 750 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 NR2F2P24468 414 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 KLRC2P26717 231 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 PRKCIP41743 596 aa8.4□□□□□ -1.06
TM4SF1-201ENST00000305366 TNNT3P45378 269 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms