RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ZSCAN9O15535 394 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 DGAT1O75907 488 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 APRTP07741 180 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 GTF2H1P32780 548 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 HSD17B3P37058 310 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CEP78Q5JTW2 689 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 BARGINQ6ZT62 677 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 VPS37AQ8NEZ2 397 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ABHD8Q96I13 439 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 C20orf96Q9NUD7 363 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF185O15231 689 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 FCER1AP12319 257 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 RCN1Q15293 331 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MS4A14Q96JA4 679 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ZIM3Q96PE6 472 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 RXFP1Q9HBX9 757 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 DLGAP2Q9P1A6 1054 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ENOPH1Q9UHY7 261 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CAB39Q9Y376 341 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 TNS3Q68CZ2 1445 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PSMC3P17980 439 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PEX5P50542 639 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CLMNQ96JQ2 1002 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MMADHCQ9H3L0 296 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 RXRGP48443 463 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF746Q6NUN9 644 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM51Q9BSJ1 452 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ATXN2Q99700 1313 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 GHRP10912 638 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 VCAM1P19320 739 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MAPK1P28482 360 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC85BQ15834 202 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 TBC1D10BQ4KMP7 808 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 TAS2R42Q7RTR8 314 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 E2F7Q96AV8 911 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 DCUN1D1Q96GG9 259 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MAGED4Q96JG8 741 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 AGBL1Q96MI9 1066 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PCDHB2Q9Y5E7 798 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 RFC5P40937 340 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 GALCP54803 685 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MAPK7Q13164 816 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 LAMC2Q13753 1193 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 DIP2AQ14689 1571 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ZCWPW2Q504Y3 356 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 XRRA1Q6P2D8 792 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SH2D3CQ8N5H7 860 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 B4GALNT2Q8NHY0 566 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MYCBPAPQ8TBZ2 947 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PLEKHA8Q96JA3 519 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 GOLPH3Q9H4A6 298 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MAP3K20Q9NYL2 800 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SLCO1B7G3V0H7 640 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 RGS4P49798 205 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 FXR2P51116 673 aaKnown RBP eCLIP7.98□□□□□ -1.134e-8■■■□□ 19
SF3B3-201ENST00000302516 PLOD1Q02809 727 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MAPRE1Q15691 268 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SNRNP35Q16560 246 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 UGT3A1Q6NUS8 523 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 FAM196AQ6ZSG2 479 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 HAUS6Q7Z4H7 955 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ACTRT1Q8TDG2 376 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MRPL48Q96GC5 212 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MCEEQ96PE7 176 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 NMRK1Q9NWW6 199 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PCSK1NQ9UHG2 260 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SPDYE5A6NIY4 337 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 FKBP6O75344 327 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 H2AFXP16104 143 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SULT1E1P49888 294 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PMS1P54277 932 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SPDYE7PQ495Y7 208 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ACBD5Q5T8D3 534 aaPredicted RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC103Q8IW40 242 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SPATA18Q8TC71 538 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SOX13Q9UN79 622 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 PCDHA10Q9Y5I2 948 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 USP1O94782 785 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 EIF2S1P05198 315 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ITGA8P53708 1063 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 MTF1Q14872 753 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 EPHA7Q15375 998 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 APOBEC3FQ8IUX4 373 aaKnown RBP7.98□□□□□ -1.13
SF3B3-201ENST00000302516 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 THNSL1Q8IYQ7 743 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 AFG1LQ8WV93 481 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ZFYVE19Q96K21 471 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CATSPER2Q96P56 530 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 NAT9Q9BTE0 207 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 CATSPERBQ9H7T0 1116 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 DTNAQ9Y4J8 743 aa7.98□□□□□ -1.13
SF3B3-201ENST00000302516 ENO4A6NNW6 628 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM66O15016 1216 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 PRPF4O43172 522 aaKnown RBP eCLIP7.97□□□□□ -1.132e-6■□□□□ 9
SF3B3-201ENST00000302516 SEC24DO94855 1032 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 GH2P01242 217 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM132DQ14C87 1099 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SNX17Q15036 470 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ARMCX4Q5H9R4 360 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms