RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
TPM3-202ENST00000302206 GLE1Q53GS7 698 aaKnown RBP12.8□□□□□ -0.36
TPM3-202ENST00000302206 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 KLHDC9Q8NEP7 349 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 SNX27Q96L92 541 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 OSMRQ99650 979 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 GTF2IRD1Q9UHL9 959 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 KCNK3O14649 394 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 DDX3YO15523 660 aaKnown RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 THAP12O43422 761 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 ITGB3P05106 788 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CXCR5P32302 372 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CDH5P33151 784 aaPredicted RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 GJA8P48165 433 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CLCN6P51797 869 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 ZBTB6Q15916 424 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 MON1BQ7L1V2 547 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 ZNF564Q8TBZ8 553 aaPredicted RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 ZNF606Q8WXB4 792 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 WNT8AQ9H1J5 351 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CARD9Q9H257 536 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 DPP3Q9NY33 737 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 CNOT8Q9UFF9 292 aaKnown RBP12.79□□□□□ -0.36
TPM3-202ENST00000302206 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 LCMT1Q9UIC8 334 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 TMEM59LQ9UK28 342 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
TPM3-202ENST00000302206 M0QZ92 97 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 PGRMC1O00264 195 aaKnown RBP12.78□□□□□ -0.36
TPM3-202ENST00000302206 MED7O43513 233 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 ERLIN1O75477 346 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 CLSTN1O94985 981 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 KRT19P08727 400 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 FGFR4P22455 802 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 CTNNA2P26232 953 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
TPM3-202ENST00000302206 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 MAP3K21Q5TCX8 1036 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 NAA35Q5VZE5 725 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 TMCO3Q6UWJ1 677 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 UBL4BQ8N7F7 174 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 CYFIP2Q96F07 1278 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 PSMB7Q99436 277 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.78□□□□□ -0.363e-15■■■□□ 16.8
TPM3-202ENST00000302206 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 MRPL47Q9HD33 250 aaKnown RBP12.78□□□□□ -0.36
TPM3-202ENST00000302206 XPNPEP3Q9NQH7 507 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 SNTG2Q9NY99 539 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 KIAA1257Q9ULG3 409 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 PACSIN2Q9UNF0 486 aaPredicted RBP12.78□□□□□ -0.36
TPM3-202ENST00000302206 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
TPM3-202ENST00000302206 TRPV2Q9Y5S1 764 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 SCINQ9Y6U3 715 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 CITO14578 2027 aa12.78□□□□□ -0.36
TPM3-202ENST00000302206 CCDC188H7C350 402 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 CEP104O60308 925 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CABYRO75952 493 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
TPM3-202ENST00000302206 PGK1P00558 417 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 HMGCRP04035 888 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CALB1P05937 261 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 WEE2P0C1S8 567 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 KCNE1P15382 129 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 MMP8P22894 467 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 POLR2BP30876 1174 aaKnown RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 GRK4P32298 578 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 SLC1A1P43005 524 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 TNNC1P63316 161 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 C2orf54Q08AI8 447 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 PTP4A2Q12974 167 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CCSAPQ6IQ19 270 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.37
TPM3-202ENST00000302206 CXCL17Q6UXB2 119 aa12.77□□□□□ -0.37
TPM3-202ENST00000302206 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms