RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 GREB1Q4ZG55 1949 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 TRIM49BA6NDI0 452 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 EIF3DO15371 548 aaKnown RBP eCLIP19.41■□□□□ 0.74e-7■□□□□ 8.2
BBC3-201ENST00000300880 CCL16O15467 120 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 GCNT3O95395 438 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 ITGA4P13612 1032 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 PMS1P54277 932 aaKnown RBP19.41■□□□□ 0.7
BBC3-201ENST00000300880 TPD52L1Q16890 204 aaPredicted RBP19.41■□□□□ 0.7
BBC3-201ENST00000300880 BMT2Q1RMZ1 405 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 RTP2Q5QGT7 225 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 TTI2Q6NXR4 508 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 MTSS1LQ765P7 747 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 ZNF720Q7Z2F6 126 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 GSTCDQ8NEC7 633 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 POLR3FQ9H1D9 316 aaPredicted RBP19.41■□□□□ 0.7
BBC3-201ENST00000300880 HSD3B7Q9H2F3 369 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 C17orf75Q9HAS0 396 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 HEBP1Q9NRV9 189 aa19.41■□□□□ 0.7
BBC3-201ENST00000300880 ADAM12O43184 909 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 PRPF6O94906 941 aaKnown RBP19.4■□□□□ 0.7
BBC3-201ENST00000300880 SRGAP2CP0DJJ0 459 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 ARL2P36404 184 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 PEX3P56589 373 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 ANKRD40Q6AI12 368 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 STXBP4Q6ZWJ1 553 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 NELFCDQ8IXH7 590 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 SPIRE2Q8WWL2 714 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 DUSP9Q99956 384 aaKnown RBP19.4■□□□□ 0.7
BBC3-201ENST00000300880 JPH2Q9BR39 696 aaPredicted RBP19.4■□□□□ 0.7
BBC3-201ENST00000300880 LAMA1P25391 3075 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 UBE4BO95155 1302 aa19.4■□□□□ 0.7
BBC3-201ENST00000300880 FASNP49327 2511 aaKnown RBP19.4■□□□□ 0.7
BBC3-201ENST00000300880 PDCD11Q14690 1871 aaKnown RBP19.39■□□□□ 0.7
BBC3-201ENST00000300880 K7ENM7 598 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 AP5Z1O43299 807 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 NCKAP1LP55160 1127 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 PLCB2Q00722 1185 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 PFKPQ01813 784 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 ALCAMQ13740 583 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 LAIR1Q6GTX8 287 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 FOXR2Q6PJQ5 311 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 NPAS3Q8IXF0 933 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 PRPF31Q8WWY3 499 aaKnown RBP19.39■□□□□ 0.69
BBC3-201ENST00000300880 BSNDQ8WZ55 320 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 TMEM143Q96AN5 459 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 IFT74Q96LB3 600 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 TSG101Q99816 390 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 CLSTN3Q9BQT9 956 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 STRA6Q9BX79 667 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 ST6GALNAC4Q9H4F1 302 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.39■□□□□ 0.69
BBC3-201ENST00000300880 SAMSN1Q9NSI8 373 aaKnown RBP19.39■□□□□ 0.69
BBC3-201ENST00000300880 SEMA4GQ9NTN9 838 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 KCNG1Q9UIX4 513 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 PCDHB13Q9Y5F0 798 aa19.39■□□□□ 0.69
BBC3-201ENST00000300880 NRG2O14511 850 aaPredicted RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 PPP1R37O75864 691 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 ZNF18P17022 549 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 PMLP29590 882 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 NPTX2P47972 431 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 SMTNP53814 917 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 LRRC63Q05C16 580 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 DMP1Q13316 513 aaPredicted RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 ZC2HC1CQ53FD0 456 aaPredicted RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 N4BP2L1Q5TBK1 243 aaPredicted RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 PRR23CQ6ZRP0 262 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 SRGAP1Q7Z6B7 1085 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 GPR65Q8IYL9 337 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 ASAP3Q8TDY4 903 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 TCP11Q8WWU5 503 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 ING5Q8WYH8 240 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 CPB2Q96IY4 423 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 PAAF1Q9BRP4 392 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 NTPCRQ9BSD7 190 aaKnown RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 COLEC11Q9BWP8 271 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 FAM126AQ9BYI3 521 aaPredicted RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 KCTD10Q9H3F6 313 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 KMT5AQ9NQR1 393 aa19.38■□□□□ 0.69
BBC3-201ENST00000300880 DNMT3BQ9UBC3 853 aaKnown RBP19.38■□□□□ 0.69
BBC3-201ENST00000300880 SPAG17Q6Q759 2223 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 CCDC169A6NNP5 214 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 SLC16A4O15374 487 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 C8AP07357 584 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 RETP07949 1114 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 KCNA4P22459 653 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 GLRA2P23416 452 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 HOXD13P35453 343 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 ADCY1Q08828 1119 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 DMWDQ09019 674 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 SRSF5Q13243 272 aaKnown RBP19.37■□□□□ 0.69
BBC3-201ENST00000300880 KNOP1Q1ED39 458 aaKnown RBP19.37■□□□□ 0.69
BBC3-201ENST00000300880 ZCWPW2Q504Y3 356 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 PPM1LQ5SGD2 360 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 SARM1Q6SZW1 724 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 HAUS6Q7Z4H7 955 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 NOC3LQ8WTT2 800 aaKnown RBP19.37■□□□□ 0.69
BBC3-201ENST00000300880 ANP32BQ92688 251 aaKnown RBP19.37■□□□□ 0.69
BBC3-201ENST00000300880 NELL2Q99435 816 aa19.37■□□□□ 0.69
BBC3-201ENST00000300880 APOL6Q9BWW8 343 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms