RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 TRIM42Q8IWZ5 723 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 ST13P4Q8IZP2 240 aaPredicted RBP11.58□□□□□ -0.55
SNX20-201ENST00000300590 PTCD3Q96EY7 689 aaKnown RBP11.58□□□□□ -0.55
SNX20-201ENST00000300590 KAT6AQ92794 2004 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ATP8B3O60423 1300 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 DDX39AO00148 427 aaKnown RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 MSH4O15457 936 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 HADHBP55084 474 aaKnown RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 TMED1Q13445 227 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 TFDP1Q14186 410 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 RASA2Q15283 850 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 BMT2Q1RMZ1 405 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 USP6NLQ92738 828 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 CCDC124Q96CT7 223 aaKnown RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 DTNBP1Q96EV8 351 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 FAM111AQ96PZ2 611 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 RTFDC1Q9BY42 306 aaPredicted RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 SHCBP1LQ9BZQ2 653 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 EURLQ9NYK6 297 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 GTF3C4Q9UKN8 822 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ZNF232Q9UNY5 417 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 MEI4A8MW99 385 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 K7ENM7 598 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 PRPF4O43172 522 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX20-201ENST00000300590 CDC16Q13042 620 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 RAPH1Q70E73 1250 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 MARK2Q7KZI7 788 aaKnown RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 NCAPG2Q86XI2 1143 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 PASD1Q8IV76 773 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 RBM15BQ8NDT2 890 aaKnown RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 ETNPPLQ8TBG4 499 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 CCDC110Q8TBZ0 833 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 OSBPL8Q9BZF1 889 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ANKRD2Q9GZV1 360 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ZNF395Q9H8N7 513 aaPredicted RBP11.58□□□□□ -0.56
SNX20-201ENST00000300590 DNPEPQ9ULA0 475 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
SNX20-201ENST00000300590 COL5A2P05997 1499 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 TYROBPO43914 113 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 CYP11B1P15538 503 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 MXI1P50539 228 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 EPHB1P54762 984 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 BPIFB4P59827 614 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 TMEM62Q0P6H9 643 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 SHROOM1Q2M3G4 852 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 ANKS1BQ7Z6G8 1248 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 SCUBE1Q8IWY4 988 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 PI4K2AQ9BTU6 479 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 CYLDQ9NQC7 956 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 PHF24Q9UPV7 400 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 SLC4A7Q9Y6M7 1214 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 DCCP43146 1447 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 PIK3CDO00329 1044 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 VAV1P15498 845 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 CDK7P50613 346 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 ALDH18A1P54886 795 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 MAP7Q14244 749 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 NFIXQ14938 502 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 ARL10Q8N8L6 244 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 MORC4Q8TE76 937 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 RILPQ96NA2 401 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 NOCTQ9UK39 431 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 LRP5O75197 1615 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 GAP43P17677 238 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 TAS2R40P59535 323 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 AP2B1P63010 937 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 CDK16Q00536 496 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 BTKQ06187 659 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 C1QTNF12Q5T7M4 302 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 ARHGAP24Q8N264 748 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 SLC26A7Q8TE54 656 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 MTBPQ96DY7 904 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 PLEKHG4BQ96PX9 1271 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 PANX3Q96QZ0 392 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 NR1H4Q96RI1 486 aaPredicted RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 OLFML3Q9NRN5 406 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 ZBTB21Q9ULJ3 1066 aa11.57□□□□□ -0.56
SNX20-201ENST00000300590 RPL26L1Q9UNX3 145 aaKnown RBP11.57□□□□□ -0.56
SNX20-201ENST00000300590 BCL9O00512 1426 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 ZSCAN9O15535 394 aaPredicted RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 CYP1A2P05177 515 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 IMPDH2P12268 514 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 GZMAP12544 262 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 DESP17661 470 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms