RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PPP1R37O75864 691 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 ATXN1P54253 815 aaKnown RBP22.79■■□□□ 1.24
SMCO4-201ENST00000298966 NCKAP1LP55160 1127 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 FANCCQ00597 558 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 FKBP3Q00688 224 aaKnown RBP22.79■■□□□ 1.24
SMCO4-201ENST00000298966 ZCWPW2Q504Y3 356 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 SLC44A4Q53GD3 710 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 LIN9Q5TKA1 542 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 CEP63Q96MT8 703 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 TRIM6Q9C030 488 aaPredicted RBP22.79■■□□□ 1.24
SMCO4-201ENST00000298966 XPNPEP1Q9NQW7 623 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 TBC1D7Q9P0N9 293 aa22.79■■□□□ 1.24
SMCO4-201ENST00000298966 MAGEC2Q9UBF1 373 aaPredicted RBP22.79■■□□□ 1.24
SMCO4-201ENST00000298966 FAM170BA6NMN3 283 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 PRR5-ARHGAP8B1AHC4 643 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 TSPAN1O60635 241 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 GNA14O95837 355 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 SERPINC1P01008 464 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 PRKCSHP14314 528 aaPredicted RBP22.78■■□□□ 1.24
SMCO4-201ENST00000298966 RPL13P26373 211 aaKnown RBP22.78■■□□□ 1.24
SMCO4-201ENST00000298966 ARHGAP8P85298 464 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 PFKPQ01813 784 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 LMNB2Q03252 620 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 ANKRD40Q6AI12 368 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 RSPO2Q6UXX9 243 aaPredicted RBP22.78■■□□□ 1.24
SMCO4-201ENST00000298966 STRA6Q9BX79 667 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 KCTD10Q9H3F6 313 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 FBXW11Q9UKB1 542 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 CDV3Q9UKY7 258 aaKnown RBP22.78■■□□□ 1.24
SMCO4-201ENST00000298966 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
SMCO4-201ENST00000298966 SFI1A8K8P3 1242 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 K7ENM7 598 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 TADA2AO75478 443 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 HNRNPA1P09651 372 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMCO4-201ENST00000298966 NTHL1P78549 312 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 GTF2BQ00403 316 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 MYBPC2Q14324 1141 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 FILIP1LQ4L180 1135 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 PPM1LQ5SGD2 360 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 HS2ST1Q7LGA3 356 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 TMEM174Q8WUU8 243 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 FGF13Q92913 245 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 TRIM44Q96DX7 344 aaPredicted RBP22.77■■□□□ 1.24
SMCO4-201ENST00000298966 CPB2Q96IY4 423 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 DUSP9Q99956 384 aaKnown RBP22.77■■□□□ 1.24
SMCO4-201ENST00000298966 SAMSN1Q9NSI8 373 aaKnown RBP22.77■■□□□ 1.24
SMCO4-201ENST00000298966 ZSCAN32Q9NX65 697 aa22.77■■□□□ 1.24
SMCO4-201ENST00000298966 SMG5Q9UPR3 1016 aaKnown RBP22.77■■□□□ 1.24
SMCO4-201ENST00000298966 TRIM49BA6NDI0 452 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 LRRC10BA6NIK2 292 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 GOLGA6L6A8MZA4 724 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 INO80B-WBP1J3KQ70 363 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 TPM2P07951 284 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ATP1A3P13637 1013 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ARL2P36404 184 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 NAMPTP43490 491 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 PMS1P54277 932 aaKnown RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 PEX3P56589 373 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 PTENP60484 403 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 MXD4Q14582 209 aaPredicted RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ZBTB41Q5SVQ8 909 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 PRSS55Q6UWB4 352 aaPredicted RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ZC3H3Q8IXZ2 948 aaKnown RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ZBTB44Q8NCP5 570 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 ACCSQ96QU6 501 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 SRRTQ9BXP5 876 aaKnown RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 POLR3FQ9H1D9 316 aaPredicted RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 LTB4R2Q9NPC1 389 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 KMT5AQ9NQR1 393 aa22.76■■□□□ 1.23
SMCO4-201ENST00000298966 LIMA1Q9UHB6 759 aaKnown RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 MTF2Q9Y483 593 aaPredicted RBP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 SF3B1O75533 1304 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMCO4-201ENST00000298966 COL4A3Q01955 1670 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 NCAM2O15394 837 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 XYLBO75191 536 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 NMT1P30419 496 aaKnown RBP22.75■■□□□ 1.23
SMCO4-201ENST00000298966 CASP5P51878 434 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 UBASH3AP57075 661 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 GRIK3Q13003 919 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 TFDP1Q14186 410 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 MAEAQ7L5Y9 396 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 HAUS6Q7Z4H7 955 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 NELL2Q99435 816 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 FGFBP2Q9BYJ0 223 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 EPC1Q9H2F5 836 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 NXF3Q9H4D5 531 aaKnown RBP22.75■■□□□ 1.23
SMCO4-201ENST00000298966 IFNKQ9P0W0 207 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 USP18Q9UMW8 372 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 POLIQ9UNA4 740 aa22.75■■□□□ 1.23
SMCO4-201ENST00000298966 MAP1BP46821 2468 aaKnown RBP22.74■■□□□ 1.23
SMCO4-201ENST00000298966 KCNJ18B7U540 433 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 CETN3O15182 167 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 PRPF6O94906 941 aaKnown RBP22.74■■□□□ 1.23
SMCO4-201ENST00000298966 C8AP07357 584 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 AKAP5P24588 427 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 HOXA9P31269 272 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 NPTX2P47972 431 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 KCNJ12Q14500 433 aa22.74■■□□□ 1.23
SMCO4-201ENST00000298966 HSP90AA2PQ14568 343 aaPredicted RBP22.74■■□□□ 1.23
SMCO4-201ENST00000298966 TCP11X2Q5H9J9 407 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms