RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CDT1Q9H211 546 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 PTPRHQ9HD43 1115 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 CNTN3Q9P232 1028 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 FBXL5Q9UKA1 691 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
RFC4-201ENST00000296273 GOLGA6L6A8MZA4 724 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 ESPNB1AK53 854 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 SLC30A4O14863 429 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 PAPSS2O95340 614 aaPredicted RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 SEC24AO95486 1093 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 MCF2P10911 925 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 CHRNB1P11230 501 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 CCT6AP40227 531 aaKnown RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 CCR2P41597 374 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 CEBPZQ03701 1054 aaKnown RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 TWF1Q12792 350 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 PLD1Q13393 1074 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 PTPAQ15257 358 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 PRR23BQ6ZRT6 265 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 ZSCAN30Q86W11 494 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 ZSCAN18Q8TBC5 510 aaPredicted RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 CSGALNACT1Q8TDX6 532 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 ZMAT2Q96NC0 199 aaKnown RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 C8orf33Q9H7E9 229 aaPredicted RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 C17orf75Q9HAS0 396 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 KCNG1Q9UIX4 513 aa11.51□□□□□ -0.57
RFC4-201ENST00000296273 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.51□□□□□ -0.57
RFC4-201ENST00000296273 COL4A2P08572 1712 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 CCDC169A6NNP5 214 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 CHADO15335 359 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 KRT37O76014 449 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 CPB1P15086 417 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 CCNE1P24864 410 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
RFC4-201ENST00000296273 NPTX2P47972 431 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
RFC4-201ENST00000296273 FOSBP53539 338 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 PEX3P56589 373 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 OSTNP61366 133 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 PTGDRQ13258 359 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 SIM2Q14190 667 aaPredicted RBP11.5□□□□□ -0.57
RFC4-201ENST00000296273 DHX8Q14562 1220 aaKnown RBP11.5□□□□□ -0.57
RFC4-201ENST00000296273 CSRP2Q16527 193 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 MPZL3Q6UWV2 235 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 LONP2Q86WA8 852 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 YAF2Q8IY57 180 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 RNF214Q8ND24 703 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 DDX12PQ92771 950 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 ZSWIM3Q96MP5 696 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 BPIFA3Q9BQP9 254 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 RAB34Q9BZG1 259 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 SEMA4GQ9NTN9 838 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 FAM13BQ9NYF5 915 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 CEP72Q9P209 647 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 ARHGAP28Q9P2N2 729 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.5□□□□□ -0.57
RFC4-201ENST00000296273 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
RFC4-201ENST00000296273 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.49□□□□□ -0.57
RFC4-201ENST00000296273 HEPACAM2A8MVW5 462 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 ARNTLO00327 626 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 MOSPD3O75425 235 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 MYL4P12829 197 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 PROZP22891 400 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 SATB1Q01826 763 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
RFC4-201ENST00000296273 FCHO2Q0JRZ9 810 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 PDIA5Q14554 519 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 ZNF174Q15697 407 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 LPAL2Q16609 132 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 DGKKQ5KSL6 1271 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 PRR23CQ6ZRP0 262 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.49□□□□□ -0.57
RFC4-201ENST00000296273 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 TARS2Q9BW92 718 aaKnown RBP11.49□□□□□ -0.57
RFC4-201ENST00000296273 SLITRK6Q9H5Y7 841 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 KMT5AQ9NQR1 393 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 HPSEQ9Y251 543 aa11.49□□□□□ -0.57
RFC4-201ENST00000296273 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
RFC4-201ENST00000296273 ZNF202O95125 648 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 MSNP26038 577 aaKnown RBP11.48□□□□□ -0.57
RFC4-201ENST00000296273 CLCN1P35523 988 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 VIPR2P41587 438 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 SYKP43405 635 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 ZNF165P49910 485 aa11.48□□□□□ -0.57
RFC4-201ENST00000296273 KPNA1P52294 538 aaPredicted RBP11.48□□□□□ -0.57
RFC4-201ENST00000296273 GAS6Q14393 721 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms