RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 NCBP1Q09161 790 aaKnown RBP17.12■□□□□ 0.33
UBXN1-201ENST00000294119 SEMA3BQ13214 749 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 EMC2Q15006 297 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 TEAD2Q15562 447 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 CDR2LQ86X02 465 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-201ENST00000294119 YAF2Q8IY57 180 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 CEP170P1Q96L14 293 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 MKNK1Q9BUB5 465 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 LRRC3Q9BY71 257 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 XPNPEP1Q9NQW7 623 aa17.12■□□□□ 0.33
UBXN1-201ENST00000294119 POLR3BQ9NW08 1133 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-201ENST00000294119 ZNF462Q96JM2 2506 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 EML1O00423 815 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 PRRG1O14668 218 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 QARSP47897 775 aaKnown RBP17.11■□□□□ 0.33
UBXN1-201ENST00000294119 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-201ENST00000294119 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-201ENST00000294119 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-201ENST00000294119 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 FSTL4Q6MZW2 842 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 CHCHD4Q8N4Q1 142 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 FAM200AQ8TCP9 573 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 ZFYVE19Q96K21 471 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 TMEM209Q96SK2 561 aa17.11■□□□□ 0.33
UBXN1-201ENST00000294119 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-201ENST00000294119 THADAQ6YHU6 1953 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
UBXN1-201ENST00000294119 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
UBXN1-201ENST00000294119 YEATS4O95619 227 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 ELF1P32519 619 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 C19orf57Q0VDD7 668 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 CAPSQ13938 189 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 INF2Q27J81 1249 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 UAP1L1Q3KQV9 507 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 C3orf58Q8NDZ4 430 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 HHIPQ96QV1 700 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 CYP4F11Q9HBI6 524 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 OBP2AQ9NY56 170 aa17.1■□□□□ 0.33
UBXN1-201ENST00000294119 TNRC6BQ9UPQ9 1833 aaKnown RBP17.1■□□□□ 0.33
UBXN1-201ENST00000294119 LAD1O00515 517 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 DNM1Q05193 864 aaKnown RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 TPGS2Q68CL5 300 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 IQCEQ6IPM2 695 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
UBXN1-201ENST00000294119 KIAA1549LQ6ZVL6 1849 aa17.09■□□□□ 0.33
UBXN1-201ENST00000294119 MYO18BQ8IUG5 2567 aa17.08■□□□□ 0.33
UBXN1-201ENST00000294119 URB1O60287 2271 aaKnown RBP17.08■□□□□ 0.33
UBXN1-201ENST00000294119 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 TBX3O15119 743 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 RECQL4O94761 1208 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 B3GAT3O94766 335 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 MYL4P12829 197 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 PTMSP20962 102 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 TOB1P50616 345 aaPredicted RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 FAM193AP78312 1265 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 TNK2Q07912 1038 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 UPP1Q16831 310 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 C11orf74Q86VG3 221 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 ARID3BQ8IVW6 561 aaPredicted RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 ASAP3Q8TDY4 903 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 LRIG1Q96JA1 1093 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 ZNF512Q96ME7 567 aaPredicted RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 FAM20AQ96MK3 541 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.08■□□□□ 0.32
UBXN1-201ENST00000294119 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 VAV3Q9UKW4 847 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 PI4KAP42356 2102 aa17.08■□□□□ 0.32
UBXN1-201ENST00000294119 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
UBXN1-201ENST00000294119 RNF40O75150 1001 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 TDP2O95551 362 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PRKCBP05771 671 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PLA2G2AP14555 144 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 WEE1P30291 646 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 CLCNKBP51801 687 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 TWF1Q12792 350 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 LMAN2Q12907 356 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 TFDP1Q14186 410 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 ITPRIPL2Q3MIP1 535 aa17.07■□□□□ 0.32
UBXN1-201ENST00000294119 STXBP5Q5T5C0 1151 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms