RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 CATSPER3Q86XQ3 398 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 GRAMD1CQ8IYS0 662 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 QKIQ96PU8 341 aaKnown RBP eCLIP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 WHRNQ9P202 907 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 CFAP73A6NFT4 308 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 MAP3K7O43318 606 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 IFRD2Q12894 506 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 STK4Q13043 487 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 THOC5Q13769 683 aaKnown RBP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 ZNF720Q7Z2F6 126 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 LRRC37BQ96QE4 947 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 TRIM45Q9H8W5 580 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 INTS9Q9NV88 658 aaKnown RBP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 SLC4A1P02730 911 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 CNTFP26441 200 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 ATN1P54259 1190 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-201ENST00000265379 SLC12A1Q13621 1099 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 SPATA18Q8TC71 538 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 BCAS4Q8TDM0 211 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 ATP8B4Q8TF62 1192 aa8.65□□□□□ -1.02
COL6A5-201ENST00000265379 MSCO60682 206 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 PALMO75781 387 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 MSH2P43246 934 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 EFHC2Q5JST6 749 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 SESTD1Q86VW0 696 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 SMYD4Q8IYR2 804 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-201ENST00000265379 ATP6V1G3Q96LB4 118 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 TSC22D3Q99576 134 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 ZBED1O96006 694 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 CCT5P48643 541 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 RSRC2Q7L4I2 434 aaKnown RBP8.65□□□□□ -1.03
COL6A5-201ENST00000265379 NUDCD1Q96RS6 583 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-201ENST00000265379 CYP2C18P33260 490 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 AHI1Q8N157 1196 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 TEX9Q8N6V9 391 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 NR1H4Q96RI1 486 aaPredicted RBP8.65□□□□□ -1.03
COL6A5-201ENST00000265379 ZFYVE28Q9HCC9 887 aa8.65□□□□□ -1.03
COL6A5-201ENST00000265379 IGKV6D-41A0A0C4DH26 115 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 VGLL3A8MV65 326 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 KRT16P08779 473 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 NCAPHQ15003 741 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EFL1Q7Z2Z2 1120 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 PCSK9Q8NBP7 692 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 SPATA4Q8NEY3 305 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 COQ7Q99807 217 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 SFMBT1Q9UHJ3 866 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 DERAQ9Y315 318 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 KIAA0100Q14667 2235 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MPDZO75970 2070 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MANSC4A6NHS7 340 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 GOLGA8RI6L899 631 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 PYGBP11216 843 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 VCAM1P19320 739 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 HMGCS2P54868 508 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 IL17RBQ9NRM6 502 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 NBNO60934 754 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ETFBP38117 255 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 DMTNQ08495 405 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EAPPQ56P03 285 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EFHC1Q5JVL4 640 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ABRAQ8N0Z2 381 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ISCUQ9H1K1 167 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EXOC1LA0A1B0GW35 172 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 POC1B-GALNT4F8VUJ3 575 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 HTR7P34969 479 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 GMPSP49915 693 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 RPS6P62753 249 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 PPARDQ03181 441 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 GRIN1Q05586 938 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 POU5F1BQ06416 359 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MESDQ14696 234 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 PLPPR4Q7Z2D5 763 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MAP4K3Q8IVH8 894 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ST13P4Q8IZP2 240 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 CCDC24Q8N4L8 307 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 CAVIN3Q969G5 261 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EMC3Q9P0I2 261 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 STRCQ7RTU9 1775 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 TNPO2O14787 897 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 AIF1P55008 147 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 DDR1Q08345 913 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 LINC00523Q86TU6 105 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 RIOX2Q8IUF8 465 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EXD1Q8NHP7 514 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 GCNAQ96QF7 691 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
COL6A5-201ENST00000265379 KLHL31Q9H511 634 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 EPB41L5Q9HCM4 733 aa8.64□□□□□ -1.03
COL6A5-201ENST00000265379 ANAPC7Q9UJX3 599 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms