RNA–Protein interactions for RNA: ENST00000263864.9

VAMP8-201, Transcript of vesicle associated membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP8, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-201ENST00000263864 HMGB1P09429 215 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 SSRP1Q08945 709 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 ELF2Q15723 593 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 UAP1L1Q3KQV9 507 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 DCAF4L1Q3SXM0 396 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 XKR4Q5GH76 650 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 EARS2Q5JPH6 523 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 NT5DC1Q5TFE4 455 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 NAIF1Q69YI7 327 aaPredicted RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 ALKAL1Q6UXT8 129 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 FBXL16Q8N461 479 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 BEST2Q8NFU1 509 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 JAKMIP1Q96N16 626 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 ADPGKQ9BRR6 497 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 KIFC3Q9BVG8 833 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 FBRSL1Q9HCM7 1045 aaKnown RBP11.65□□□□□ -0.54
VAMP8-201ENST00000263864 INVSQ9Y283 1065 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 MSRB2Q9Y3D2 182 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.54
VAMP8-201ENST00000263864 TNRC6BQ9UPQ9 1833 aaKnown RBP11.65□□□□□ -0.55
VAMP8-201ENST00000263864 URB1O60287 2271 aaKnown RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 DPYSL4O14531 572 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 MEFVO15553 781 aaPredicted RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 MARCH6O60337 910 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 RNF40O75150 1001 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 RHOBTB1O94844 696 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 OR4Q2P0C623 313 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 IRX4P78413 519 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 RABEP1Q15276 862 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 MAPK6Q16659 721 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 GALNT17Q6IS24 598 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 ZNF280DQ6N043 979 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 KCNB2Q92953 911 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 C18orf25Q96B23 403 aaPredicted RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 SUSD3Q96L08 255 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
VAMP8-201ENST00000263864 HPS4Q9NQG7 708 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 GJB4Q9NTQ9 266 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 PLXNB3Q9ULL4 1909 aa11.64□□□□□ -0.55
VAMP8-201ENST00000263864 ANK1P16157 1881 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 SPAARA0A1B0GVQ0 90 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
VAMP8-201ENST00000263864 DTNBO60941 627 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 ATG13O75143 517 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 DEXIO95424 95 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
VAMP8-201ENST00000263864 CPB1P15086 417 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 BCKDHBP21953 392 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 U2AF2P26368 475 aaKnown RBP eCLIP11.63□□□□□ -0.55
VAMP8-201ENST00000263864 EVCP57679 992 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 PMS2CLQ68D20 193 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 PROSER1Q86XN7 944 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 TTC9BQ8N6N2 239 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 BPIFB1Q8TDL5 484 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 DDX12PQ92771 950 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 EZH1Q92800 747 aaPredicted RBP11.63□□□□□ -0.55
VAMP8-201ENST00000263864 PGLYRP2Q96PD5 576 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 FAM83CQ9BQN1 747 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
VAMP8-201ENST00000263864 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 OBP2AQ9NY56 170 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
VAMP8-201ENST00000263864 OBSL1O75147 1896 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 KHNYNO15037 678 aaKnown RBP11.62□□□□□ -0.55
VAMP8-201ENST00000263864 SOAT2O75908 522 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 SPATA31C1P0DKV0 1188 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 ATP2B1P20020 1258 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 GBP1P32455 592 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 ANAPC15P60006 121 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 OSTNP61366 133 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 CYP4F8P98187 520 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 GRSF1Q12849 480 aaKnown RBP eCLIP11.62□□□□□ -0.55
VAMP8-201ENST00000263864 DUSP4Q13115 394 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 ATF7IP2Q5U623 682 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 TRIM68Q6AZZ1 485 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 BLOC1S2Q6QNY1 142 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 RIN3Q8TB24 985 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 ATXN3LQ9H3M9 355 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 GKN1Q9NS71 199 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
VAMP8-201ENST00000263864 SNX14Q9Y5W7 946 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms