RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 PHF13Q86YI8 300 aaPredicted RBP16.83■□□□□ 0.29
VPS26A-201ENST00000263559 HNRNPLLQ8WVV9 542 aaKnown RBP16.83■□□□□ 0.29
VPS26A-201ENST00000263559 ALG3Q92685 438 aa16.83■□□□□ 0.29
VPS26A-201ENST00000263559 HINFPQ9BQA5 517 aa16.83■□□□□ 0.29
VPS26A-201ENST00000263559 NOC2LQ9Y3T9 749 aaKnown RBP16.83■□□□□ 0.29
VPS26A-201ENST00000263559 DNAH12Q6ZR08 3092 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 PGRMC1O00264 195 aaKnown RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 RRP9O43818 475 aaKnown RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 PTP4A2Q12974 167 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 UBXN11Q5T124 520 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 ALKAL1Q6UXT8 129 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 MMS22LQ6ZRQ5 1243 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 WHAMMQ8TF30 809 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 KRT35Q92764 455 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 VCPIP1Q96JH7 1222 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 APOL6Q9BWW8 343 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 RNF19AQ9NV58 838 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 DMGDHQ9UI17 866 aaKnown RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 ANAPC7Q9UJX3 599 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 SCN1AP35498 2009 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 MIF4GDA9UHW6 222 aaKnown RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 RECQL4O94761 1208 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 RAD23BP54727 409 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 SLC7A5Q01650 507 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 ORC1Q13415 861 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 ZBTB6Q15916 424 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 SMYD5Q6GMV2 418 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-201ENST00000263559 TRIM7Q9C029 511 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 CARD9Q9H257 536 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 DERAQ9Y315 318 aa16.83■□□□□ 0.28
VPS26A-201ENST00000263559 PDCD11Q14690 1871 aaKnown RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 TRPA1O75762 1119 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 ASGR1P07306 291 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 KCNA10Q16322 511 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 FAM47CQ5HY64 1035 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 GLRA4Q5JXX5 417 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 LIN9Q5TKA1 542 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 CD101Q93033 1021 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 WNT8BQ93098 351 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 HMGXB4Q9UGU5 601 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 PCDHGC3Q9UN70 934 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 ERLIN1O75477 346 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 STAU1O95793 577 aaKnown RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 P4HA1P13674 534 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 MRPS6P82932 125 aaKnown RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 ZNF211Q13398 564 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 BEND6Q5SZJ8 279 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 C8orf74Q6P047 294 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 FAM228AQ86W67 206 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 WDTC1Q8N5D0 677 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 C1orf131Q8NDD1 294 aaKnown RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-201ENST00000263559 KRT12Q99456 494 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 AP1M1Q9BXS5 423 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 CYP3A43Q9HB55 503 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
VPS26A-201ENST00000263559 SPOPO43791 374 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CILPO75339 1184 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CD19P15391 556 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 MMP8P22894 467 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 PEX5P50542 639 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 PPP1R2P3Q6NXS1 205 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 UBL4BQ8N7F7 174 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 SLC4A11Q8NBS3 891 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CD99L2Q8TCZ2 262 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 WNT8AQ9H1J5 351 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 KLK14Q9P0G3 267 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CNTN3Q9P232 1028 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 TTC7AQ9ULT0 858 aaPredicted RBP16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CDY2AQ9Y6F7 541 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 PPEF2O14830 753 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 LSM8O95777 96 aaKnown RBP16.81■□□□□ 0.28
VPS26A-201ENST00000263559 PAEPP09466 180 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 MCM3P25205 808 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 MAMLD1Q13495 774 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
VPS26A-201ENST00000263559 ELOVL4Q9GZR5 314 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
VPS26A-201ENST00000263559 FGGP02679 453 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 TNNC1P63316 161 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 GLE1Q53GS7 698 aaKnown RBP16.8■□□□□ 0.28
VPS26A-201ENST00000263559 PLEKHA7Q6IQ23 1121 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 KLHL7Q8IXQ5 586 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 ZNF518BQ9C0D4 1074 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 PARP2Q9UGN5 583 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 M0QZ92 97 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 KRIT1O00522 736 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 CDH5P33151 784 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-201ENST00000263559 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms