RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 HAPLN2Q9GZV7 340 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 DERAQ9Y315 318 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 ASB3Q9Y575 518 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 PIAS3Q9Y6X2 628 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 HEPACAM2A8MVW5 462 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 CYB561D2O14569 222 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 SPTLC1O15269 473 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
TRAF4-202ENST00000262396 PIGRP01833 764 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 NFICP08651 508 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 CCR2P41597 374 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 TAF6P49848 677 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 NRLP54845 237 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 LILRA4P59901 499 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ZNF528Q3MIS6 628 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ZC2HC1CQ53FD0 456 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-202ENST00000262396 C9orf57Q5W0N0 161 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 MAP4K3Q8IVH8 894 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 MFSD6LQ8IWD5 586 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ATAD1Q8NBU5 361 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ASB7Q9H672 318 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 LMAN1LQ9HAT1 526 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-202ENST00000262396 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 ZSCAN32Q9NX65 697 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 DPP3Q9NY33 737 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 CPSF3Q9UKF6 684 aaKnown RBP13.25□□□□□ -0.29
TRAF4-202ENST00000262396 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
TRAF4-202ENST00000262396 MTMR11A4FU01 709 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 MEFVO15553 781 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 IL18RAPO95256 599 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GCNT3O95395 438 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GAP43P17677 238 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GABRR2P28476 465 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 STAT6P42226 847 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 ZNF131P52739 623 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 TFAMQ00059 246 aaKnown RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GTF2BQ00403 316 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 LRRC32Q14392 662 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 SV2CQ496J9 727 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GPR158Q5T848 1215 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 C1orf228Q6PIY5 440 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 VITQ6UXI7 678 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 DNAJB7Q7Z6W7 309 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 SFR1Q86XK3 245 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 DCP1BQ8IZD4 617 aaKnown RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 TMEM130Q8N3G9 435 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 SHKBP1Q8TBC3 707 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 CACTINQ8WUQ7 758 aaKnown RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 EPSTI1Q96J88 318 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 ZSWIM3Q96MP5 696 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 ACCSQ96QU6 501 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
TRAF4-202ENST00000262396 TBC1D7Q9P0N9 293 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 GMEB2Q9UKD1 530 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
TRAF4-202ENST00000262396 CITO14578 2027 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 USP34Q70CQ2 3546 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 ANKRD63C9JTQ0 380 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 PPEF2O14830 753 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 SOAT2O75908 522 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 FCARP24071 287 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CCNE1P24864 410 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CDC25CP30307 473 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CCR3P51677 355 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CDR1P51861 262 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 TSPY1Q01534 308 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 GRIN1Q05586 938 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 TSSK4Q6SA08 328 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 GIPC2Q8TF65 315 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 C8orf33Q9H7E9 229 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-202ENST00000262396 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-202ENST00000262396 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 TRIP11Q15643 1979 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
TRAF4-202ENST00000262396 MYH11P35749 1972 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 HUS1O60921 280 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
TRAF4-202ENST00000262396 KRT19P08727 400 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 PNPLA4P41247 253 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms