RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 GALNTL6Q49A17 601 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 SEPT14Q6ZU15 432 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 DNERQ8NFT8 737 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 ZBTB10Q96DT7 871 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 PCYT2Q99447 389 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 YIPF3Q9GZM5 350 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 ETAA1Q9NY74 926 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 FBXO40Q9UH90 709 aa23.96■■□□□ 1.43
MCF2L-201ENST00000261963 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.96■■□□□ 1.43
MCF2L-201ENST00000261963 A0A0B4J269 797 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 ATP2A2P16615 1042 aaKnown RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 FGFR4P22455 802 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 NSFP46459 744 aaKnown RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 IFNAR2P48551 515 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 MKRN4PQ13434 485 aaPredicted RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 SGO2Q562F6 1265 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 ANKRD20A2Q5SQ80 823 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 NOL9Q5SY16 702 aaKnown RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 C6orf118Q5T5N4 469 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 ANKRD20A1Q5TYW2 823 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 ANKRD20A3Q5VUR7 823 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 SCARA3Q6AZY7 606 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 TRIM11Q96F44 468 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 DDX27Q96GQ7 796 aaKnown RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 NIFKQ9BYG3 293 aaKnown RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 GGA3Q9NZ52 723 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 ANKFY1Q9P2R3 1169 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 GGT7Q9UJ14 662 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 USP15Q9Y4E8 981 aaPredicted RBP23.95■■□□□ 1.43
MCF2L-201ENST00000261963 CD2APQ9Y5K6 639 aa23.95■■□□□ 1.43
MCF2L-201ENST00000261963 SMIM23A6NLE4 172 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 DAB2IPQ5VWQ8 1189 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 CROCCP2Q86T23 111 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 MSTO1Q9BUK6 570 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 CHST7Q9NS84 486 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 UMODL1Q5DID0 1318 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 ADGRA2Q96PE1 1338 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 CNTNAP2Q9UHC6 1331 aa23.95■■□□□ 1.42
MCF2L-201ENST00000261963 SNUPNO95149 360 aaKnown RBP23.94■■□□□ 1.42
MCF2L-201ENST00000261963 KRT16P08779 473 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 SLC1A1P43005 524 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 SLFN12LQ6IEE8 588 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 CHST13Q8NET6 341 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 OR5B17Q8NGF7 314 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 SLC7A3Q8WY07 619 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 PLVAPQ9BX97 442 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 STK38LQ9Y2H1 464 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 SRCAPQ6ZRS2 3230 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 A6NHS1 94 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 O00370 1275 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 RIPK2O43353 540 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 RARGP13631 454 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 UBA1P22314 1058 aaKnown RBP23.94■■□□□ 1.42
MCF2L-201ENST00000261963 MSH2P43246 934 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 CCNG1P51959 295 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 NOMO3P69849 1222 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 LACTBP83111 547 aaPredicted RBP23.94■■□□□ 1.42
MCF2L-201ENST00000261963 ATP11AP98196 1134 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 BNIP1Q12981 228 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 TMEM270Q6UE05 265 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 PASD1Q8IV76 773 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 ATG4AQ8WYN0 398 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 CGRRF1Q99675 332 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 ARHGEF3Q9NR81 526 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 LOC285556D6RIA3 1793 aa23.94■■□□□ 1.42
MCF2L-201ENST00000261963 GSTTP1A0A1W2PQM5 241 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 A8MUI8 341 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 OAS1P00973 400 aaKnown RBP23.93■■□□□ 1.42
MCF2L-201ENST00000261963 KRT17Q04695 432 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SNX1Q13596 522 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 PRKG1Q13976 671 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 TARBP2Q15633 366 aaKnown RBP23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SH3D19Q5HYK7 790 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 ABRAQ8N0Z2 381 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 ANKRD35Q8N283 1001 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 C11orf70Q9BRQ4 267 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 NUB1Q9Y5A7 615 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 PCDHB4Q9Y5E5 795 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 PROSCO94903 275 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 LINGO3P0C6S8 592 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SSTR3P32745 418 aaPredicted RBP23.93■■□□□ 1.42
MCF2L-201ENST00000261963 ZNF568Q3ZCX4 644 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SEZ6Q53EL9 994 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 UHMK1Q8TAS1 419 aaKnown RBP23.93■■□□□ 1.42
MCF2L-201ENST00000261963 STMN4Q9H169 189 aaPredicted RBP23.93■■□□□ 1.42
MCF2L-201ENST00000261963 AAASQ9NRG9 546 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 ZFATQ9P243 1243 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 CNTN6Q9UQ52 1028 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SIP14410 1827 aa23.93■■□□□ 1.42
MCF2L-201ENST00000261963 SUN1O94901 812 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 PECAM1P16284 738 aaPredicted RBP23.92■■□□□ 1.42
MCF2L-201ENST00000261963 CAPSQ13938 189 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 TREML2Q5T2D2 321 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 KIF2BQ8N4N8 673 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 TEX9Q8N6V9 391 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.92■■□□□ 1.42
MCF2L-201ENST00000261963 ANKRD27Q96NW4 1050 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 TMEM109Q9BVC6 243 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 TTLL13PA6NNM8 815 aa23.92■■□□□ 1.42
MCF2L-201ENST00000261963 FARP2O94887 1054 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms