RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 HDAC11Q96DB2 347 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 MCEEQ96PE7 176 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 ZBBXA8MT70 800 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 XPO1O14980 1071 aaKnown RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 ENO3P13929 434 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 MTMR1Q13613 665 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 HES6Q96HZ4 224 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 ZNF184Q99676 751 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
SREBF1-201ENST00000261646 DDX56Q9NY93 547 aaKnown RBP17.02■□□□□ 0.32
SREBF1-201ENST00000261646 LGR5O75473 907 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.31
SREBF1-201ENST00000261646 RBP3P10745 1247 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 CYP11B1P15538 503 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 DRG2P55039 364 aaKnown RBP17.02■□□□□ 0.31
SREBF1-201ENST00000261646 SMTNL2Q2TAL5 461 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 ACBD5Q5T8D3 534 aaPredicted RBP17.02■□□□□ 0.31
SREBF1-201ENST00000261646 IYDQ6PHW0 289 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 EME1Q96AY2 570 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 PWWP2AQ96N64 755 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.31
SREBF1-201ENST00000261646 ZCWPW1Q9H0M4 648 aa17.02■□□□□ 0.31
SREBF1-201ENST00000261646 WARS2Q9UGM6 360 aaKnown RBP17.02■□□□□ 0.31
SREBF1-201ENST00000261646 KRT36O76013 467 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 BGNP21810 368 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 GSTT1P30711 240 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 SLC44A4Q53GD3 710 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ACAD11Q709F0 780 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 CCNYL1Q8N7R7 359 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 C7orf31Q8N865 590 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF75CPQ92670 426 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-201ENST00000261646 CBWD1Q9BRT8 395 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 DPPA5A6NC42 116 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 NEMP1O14524 444 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 GH1P01241 217 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ADRA1DP25100 572 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ISLR2Q6UXK2 745 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 TCP10LQ8TDR4 215 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 PAFAH2Q99487 392 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ERVK-5Q9HDB9 667 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 FCHO1O14526 889 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 SEC24DO94855 1032 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-201ENST00000261646 LCA5LO95447 670 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 NFIAQ12857 509 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 BLMHQ13867 455 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 TMEM119Q4V9L6 283 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 ANKRD36BP1Q96IX9 119 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
SREBF1-201ENST00000261646 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
SREBF1-201ENST00000261646 DTNAQ9Y4J8 743 aa17.01■□□□□ 0.31
SREBF1-201ENST00000261646 MSH4O15457 936 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 TCN1P20061 433 aaPredicted RBP17■□□□□ 0.31
SREBF1-201ENST00000261646 MROH9Q5TGP6 573 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 RSPH3Q86UC2 560 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 DNAJC19Q96DA6 116 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 CYP26B1Q9NR63 512 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 KLHL2O95198 593 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 ARL4AP40617 200 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 OCRLQ01968 901 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
SREBF1-201ENST00000261646 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 GPD1LQ8N335 351 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
SREBF1-201ENST00000261646 SDCCAG3Q96C92 435 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 CNBD2Q96M20 576 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 CCT7Q99832 543 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 DDX18Q9NVP1 670 aaKnown RBP17■□□□□ 0.31
SREBF1-201ENST00000261646 NR2E1Q9Y466 385 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 FOXO6A8MYZ6 492 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 ACOT2P49753 483 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 AQP5P55064 265 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 BNIP1Q12981 228 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 FBXO36Q8NEA4 188 aa17■□□□□ 0.31
SREBF1-201ENST00000261646 CLPTM1O96005 669 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 KRT3P12035 628 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 CASP2P42575 452 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 COPAP53621 1224 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 LRRC6Q86X45 466 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 FAM13CQ8NE31 585 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 KIAA1586Q9HCI6 787 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 MID2Q9UJV3 735 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 STRIP2Q9ULQ0 834 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 AFG3L2Q9Y4W6 797 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 ZHX2Q9Y6X8 837 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 KPNA7A9QM74 516 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 P4HA2O15460 535 aa16.99■□□□□ 0.31
SREBF1-201ENST00000261646 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-201ENST00000261646 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms