RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SMG8Q8ND04 991 aaKnown RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 ZNF564Q8TBZ8 553 aaPredicted RBP23.84■■□□□ 1.41
SIX3-201ENST00000260653 PARP2Q9UGN5 583 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 HMGXB4Q9UGU5 601 aa23.84■■□□□ 1.41
SIX3-201ENST00000260653 RPS6KA5O75582 802 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 MTA2O94776 668 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 GNRH1P01148 92 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 YY1P25490 414 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 C2orf54Q08AI8 447 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 ORC1Q13415 861 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 MON1BQ7L1V2 547 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 HES6Q96HZ4 224 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 RPGRIP1Q96KN7 1286 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 AMFRQ9UKV5 643 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 ST3GAL5Q9UNP4 418 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 RHOXF2BP0C7M4 288 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 LLGL2Q6P1M3 1020 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 ZNF572Q7Z3I7 529 aaPredicted RBP23.83■■□□□ 1.41
SIX3-201ENST00000260653 PHLDB2Q86SQ0 1253 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 FAXDC2Q96IV6 333 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 BTBD6Q96KE9 485 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 RHOXF2Q9BQY4 288 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 ANKZF1Q9H8Y5 726 aa23.83■■□□□ 1.41
SIX3-201ENST00000260653 RNF216Q9NWF9 866 aaPredicted RBP23.83■■□□□ 1.41
SIX3-201ENST00000260653 BCCIPQ9P287 314 aaKnown RBP eCLIP23.83■■□□□ 1.41
SIX3-201ENST00000260653 TMEM110-MUSTN1A8MSY1 372 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 FKTNO75072 461 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 RRM1P23921 792 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 ACLYP53396 1101 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 MGAT3Q09327 533 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 NFX1Q12986 1120 aaKnown RBP23.82■■□□□ 1.4
SIX3-201ENST00000260653 ITGA7Q13683 1181 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 WHAMMQ8TF30 809 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 TWNKQ96RR1 684 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 C11orf70Q9BRQ4 267 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 OSBPL7Q9BZF2 842 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 THPOP40225 353 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 C11orf63Q6NUN7 778 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 RPAINQ86UA6 219 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 TRMT13Q9NUP7 481 aaKnown RBP23.82■■□□□ 1.4
SIX3-201ENST00000260653 UVRAGQ9P2Y5 699 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 ALG6Q9Y672 507 aa23.82■■□□□ 1.4
SIX3-201ENST00000260653 STAU1O95793 577 aaKnown RBP23.81■■□□□ 1.4
SIX3-201ENST00000260653 P4HA1P13674 534 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 PAFAH1B1P43034 410 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 RAD23BP54727 409 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 MESDQ14696 234 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 CFAP221Q4G0U5 840 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 SPATA4Q8NEY3 305 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 BEST2Q8NFU1 509 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 SMIM28A0A1B0GU29 152 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 CILPO75339 1184 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 H2AFXP16104 143 aaPredicted RBP23.81■■□□□ 1.4
SIX3-201ENST00000260653 TNNC1P63316 161 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 PARD6BQ9BYG5 372 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 CYP3A43Q9HB55 503 aa23.81■■□□□ 1.4
SIX3-201ENST00000260653 CD19P15391 556 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 RNASE9P60153 205 aaKnown RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 TUBB4BP68371 445 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 MMS22LQ6ZRQ5 1243 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 PDCL2Q8N4E4 241 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 CALR3Q96L12 384 aaKnown RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 ELOVL4Q9GZR5 314 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 ADAM22Q9P0K1 906 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 MYO1EQ12965 1108 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 PHF13Q86YI8 300 aaPredicted RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 SLC4A11Q8NBS3 891 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 C1orf131Q8NDD1 294 aaKnown RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 TRIM11Q96F44 468 aa23.8■■□□□ 1.4
SIX3-201ENST00000260653 AGO3Q9H9G7 860 aaKnown RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 AVENQ9NQS1 362 aaPredicted RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 UBQLN1Q9UMX0 589 aaKnown RBP23.8■■□□□ 1.4
SIX3-201ENST00000260653 MYBL1P10243 752 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 XKR4Q5GH76 650 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 LHX8Q68G74 356 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 CPNE8Q86YQ8 564 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 RNF14Q9UBS8 474 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 DDX3YO15523 660 aaKnown RBP23.79■■□□□ 1.4
SIX3-201ENST00000260653 PTP4A2Q12974 167 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 SLAIN1Q8ND83 568 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 PBKQ96KB5 322 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 PNKPQ96T60 521 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 TRIM7Q9C029 511 aa23.79■■□□□ 1.4
SIX3-201ENST00000260653 CES2O00748 559 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 CABYRO75952 493 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 PAEPP09466 180 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 ITIH3Q06033 890 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 C9orf57Q5W0N0 161 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 MSANTD4Q8NCY6 345 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 PCDHGC3Q9UN70 934 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 NOD1Q9Y239 953 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 MEIS3P2A8K0S8 358 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 TLR3O15455 904 aaKnown RBP23.78■■□□□ 1.4
SIX3-201ENST00000260653 CEP104O60308 925 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 LSM8O95777 96 aaKnown RBP23.78■■□□□ 1.4
SIX3-201ENST00000260653 KCNE1P15382 129 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 COMTP21964 271 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 GRK4P32298 578 aa23.78■■□□□ 1.4
SIX3-201ENST00000260653 SOX4Q06945 474 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms