RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TRIM21P19474 475 aaKnown RBP22.21■■□□□ 1.15
RTCA-201ENST00000260563 MYL6P60660 151 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 TRIM14Q14142 442 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 RNF168Q8IYW5 571 aaPredicted RBP22.21■■□□□ 1.15
RTCA-201ENST00000260563 VPS52Q8N1B4 723 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 CCDC150Q8NCX0 1101 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 EHBP1Q8NDI1 1231 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 NEK11Q8NG66 645 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 SUSD3Q96L08 255 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 TLR9Q9NR96 1032 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 FAM207AQ9NSI2 230 aaPredicted RBP22.21■■□□□ 1.15
RTCA-201ENST00000260563 TRANK1O15050 2925 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 SPTLC1O15269 473 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 CSPG5O95196 566 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 STAU1O95793 577 aaKnown RBP22.2■■□□□ 1.14
RTCA-201ENST00000260563 EFEMP2O95967 443 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 USP41Q3LFD5 358 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 FIGNQ5HY92 759 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 FAM171A1Q5VUB5 890 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 TRIM65Q6PJ69 517 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.2■■□□□ 1.14
RTCA-201ENST00000260563 PPFIBP1Q86W92 1011 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 IQCDQ96DY2 449 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 INTS2Q9H0H0 1204 aaKnown RBP22.2■■□□□ 1.14
RTCA-201ENST00000260563 LMAN2LQ9H0V9 348 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 PLCB1Q9NQ66 1216 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 RAB20Q9NX57 234 aa22.2■■□□□ 1.14
RTCA-201ENST00000260563 ARHGEF37A1IGU5 675 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 M0QZQ0 153 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 SYN3O14994 580 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 GYPCP04921 128 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 URODP06132 367 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 PTMAP06454 111 aaKnown RBP22.19■■□□□ 1.14
RTCA-201ENST00000260563 ODC1P11926 461 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 SGSM1Q2NKQ1 1148 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 CEP57Q86XR8 500 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 LMO3Q8TAP4 145 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 TAF4BQ92750 862 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 SENP8Q96LD8 212 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 FAM161BQ96MY7 647 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 TTYH3Q9C0H2 523 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 ZBP1Q9H171 429 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 XYLT2Q9H1B5 865 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 PRDM12Q9H4Q4 367 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 VRTNQ9H8Y1 702 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 ENTPD7Q9NQZ7 604 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 SNX9Q9Y5X1 595 aa22.19■■□□□ 1.14
RTCA-201ENST00000260563 RFXAPO00287 272 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 ASS1P00966 412 aaKnown RBP22.18■■□□□ 1.14
RTCA-201ENST00000260563 TPM1P09493 284 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 DNAJB1P25685 340 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 TKTP29401 623 aaKnown RBP22.18■■□□□ 1.14
RTCA-201ENST00000260563 GLUD2P49448 558 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 TNNC1P63316 161 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 NOP14P78316 857 aaKnown RBP22.18■■□□□ 1.14
RTCA-201ENST00000260563 BMS1Q14692 1282 aaKnown RBP22.18■■□□□ 1.14
RTCA-201ENST00000260563 GRIN2CQ14957 1233 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 ZNF667Q5HYK9 610 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 KIAA1841Q6NSI8 718 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 DPY19L2P1Q6NXN4 242 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 CCDC186Q7Z3E2 898 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 CPLX3Q8WVH0 158 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 TCF25Q9BQ70 676 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 TTPALQ9BTX7 342 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 SIX2Q9NPC8 291 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 GDAP2Q9NXN4 497 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 PCDHB8Q9UN66 801 aa22.18■■□□□ 1.14
RTCA-201ENST00000260563 CYB561D2O14569 222 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 EPHB6O15197 1021 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 NOL4O94818 638 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 CASP14P31944 242 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 CA8P35219 290 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 FXR1P51114 621 aaKnown RBP eCLIP22.17■■□□□ 1.14
RTCA-201ENST00000260563 GSDMDP57764 484 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 APBA1Q02410 837 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 PTPROQ16827 1216 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 WDR72Q3MJ13 1102 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 KLHDC7AQ5VTJ3 777 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 TAS1R1Q7RTX1 841 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 TMC7Q7Z402 723 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 SEMA4DQ92854 862 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 B3GALT6Q96L58 329 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 PI4K2AQ9BTU6 479 aa22.17■■□□□ 1.14
RTCA-201ENST00000260563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.17■■□□□ 1.142e-9■■■■■ 223.6
RTCA-201ENST00000260563 A0A1W2PQJ5 194 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 LPXNO60711 386 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 HUS1O60921 280 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 CTSAP10619 480 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 P4HA1P13674 534 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 FGFR3P22607 806 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 WDR44Q5JSH3 913 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 RTP2Q5QGT7 225 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 SPOPLQ6IQ16 392 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 APPL2Q8NEU8 664 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 GANQ9H2C0 597 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 CHST7Q9NS84 486 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 NXF1Q9UBU9 619 aaKnown RBP22.16■■□□□ 1.14
RTCA-201ENST00000260563 DSEQ9UL01 958 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 CAPN11Q9UMQ6 739 aa22.16■■□□□ 1.14
RTCA-201ENST00000260563 AKR1B15C9JRZ8 316 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms