RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LEXMQ3ZCV2 418 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 TRAPPC11Q7Z392 1133 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 GLYCTKQ8IVS8 523 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 SENP8Q96LD8 212 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 SIX4Q9UIU6 781 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 BACE2Q9Y5Z0 518 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 CETN3O15182 167 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 CLDN10P78369 228 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 FKBP3Q00688 224 aaKnown RBP18.05■□□□□ 0.48
SDCBP-201ENST00000260130 SV2CQ496J9 727 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 SCARA3Q6AZY7 606 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 PALB2Q86YC2 1186 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 TMC2Q8TDI7 906 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 ZNF516Q92618 1163 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 BORCS6Q96GS4 357 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
SDCBP-201ENST00000260130 TRIM49BA6NDI0 452 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 LRRIQ3A6PVS8 624 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 KPNA7A9QM74 516 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 H7C4K7 107 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 GLUD1P00367 558 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 C1RP00736 705 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 KLHL10Q6JEL2 608 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 ANKRD54Q6NXT1 300 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 FAM186BQ8IYM0 893 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 EEF2KMTQ96G04 330 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 ASB2Q96Q27 587 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 TIMM13Q9Y5L4 95 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 A0A0C4DFX4 3053 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 CDC25BP30305 580 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 OR1D2P34982 312 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 AP3M2P53677 418 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 DLG4P78352 724 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 RSPO2Q6UXX9 243 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 INTS8Q75QN2 995 aaKnown RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 USP37Q86T82 979 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-201ENST00000260130 MKNK1Q9BUB5 465 aa18.04■□□□□ 0.48
SDCBP-201ENST00000260130 ADAM12O43184 909 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 TGM5O43548 720 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 OAZ2O95190 189 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 ODC1P11926 461 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 HOXB8P17481 243 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-201ENST00000260130 TYMPP19971 482 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CLUL1Q15846 466 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 LILRA6Q6PI73 481 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CCDC186Q7Z3E2 898 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 ZC3H3Q8IXZ2 948 aaKnown RBP18.03■□□□□ 0.48
SDCBP-201ENST00000260130 NELFBQ8WX92 580 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 DNAJC25Q9H1X3 360 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CD207Q9UJ71 328 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CDY1Q9Y6F8 540 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 BRWD1Q9NSI6 2320 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CYB561D2O14569 222 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 IKBKBO14920 756 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CST3P01034 146 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-201ENST00000260130 KRT13P13646 458 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 VAMP7P51809 220 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 MYO1EQ12965 1108 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 RAB33AQ14088 237 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 CTXN3Q4LDR2 81 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 ZNF280DQ6N043 979 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 DZANK1Q9NVP4 752 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 DPP7Q9UHL4 492 aa18.03■□□□□ 0.48
SDCBP-201ENST00000260130 BICDL2A1A5D9 508 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 GOLGA6L19H0YKK7 550 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 CYP11A1P05108 521 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 KCNQ1P51787 676 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 PUS10Q3MIT2 529 aaKnown RBP18.02■□□□□ 0.48
SDCBP-201ENST00000260130 SLC8B1Q6J4K2 584 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 SYCE2Q6PIF2 218 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 FOXR2Q6PJQ5 311 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 HPDLQ96IR7 371 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 FBXL5Q9UKA1 691 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 DSEQ9UL01 958 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.48
SDCBP-201ENST00000260130 VWA8A3KMH1 1905 aa18.02■□□□□ 0.47
SDCBP-201ENST00000260130 C4BPAP04003 597 aaKnown RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 SPATA31D3P0C874 917 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 EPB41P11171 864 aaKnown RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 ENPEPQ07075 957 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 BFSP1Q12934 665 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 PAK1Q13153 545 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 STX1AQ16623 288 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 OVOS1Q6IE37 1185 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 TTI2Q6NXR4 508 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 SPATA31D4Q6ZUB0 917 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 SMRP1Q8NCR6 262 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 HDAC7Q8WUI4 952 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 MAN1C1Q9NR34 630 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 GDAP2Q9NXN4 497 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 PHACTR2O75167 634 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms