RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 GTF2IRD1Q9UHL9 959 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 L1RE1Q9UN81 338 aa29.49■■■□□ 2.31
CCM2-201ENST00000258781 KRT19P08727 400 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 RNASE9P60153 205 aaKnown RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 TMEM132DQ14C87 1099 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 CATSPER4Q7RTX7 472 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 PCSK9Q8NBP7 692 aaKnown RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 CXorf38Q8TB03 319 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 CHORDC1Q9UHD1 332 aaPredicted RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 GRIN2DO15399 1336 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 CCDC188H7C350 402 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 DARSP14868 501 aaKnown RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 CD58P19256 250 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 COMTP21964 271 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 LIN9Q5TKA1 542 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 DCAF12L1Q5VU92 463 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 CCNI2Q6ZMN8 369 aaPredicted RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 DNAJB3Q8WWF6 145 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 ZSWIM1Q9BR11 485 aa29.48■■■□□ 2.31
CCM2-201ENST00000258781 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.48■■■□□ 2.31
CCM2-201ENST00000258781 DMGDHQ9UI17 866 aaKnown RBP29.48■■■□□ 2.31
CCM2-201ENST00000258781 SPDYE4A6NLX3 237 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 TMEM110-MUSTN1A8MSY1 372 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 LSM8O95777 96 aaKnown RBP29.47■■■□□ 2.31
CCM2-201ENST00000258781 FGFR4P22455 802 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 HOXA11P31270 313 aaPredicted RBP29.47■■■□□ 2.31
CCM2-201ENST00000258781 GDF6Q6KF10 455 aaPredicted RBP29.47■■■□□ 2.31
CCM2-201ENST00000258781 SLC27A1Q6PCB7 646 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 HDXQ7Z353 690 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 KRT222Q8N1A0 295 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 HDAC7Q8WUI4 952 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 CD101Q93033 1021 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 UNC93B1Q9H1C4 597 aa29.47■■■□□ 2.31
CCM2-201ENST00000258781 MAP2K7O14733 419 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 SASH3O75995 380 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 MYCP01106 439 aaPredicted RBP29.46■■■□□ 2.31
CCM2-201ENST00000258781 ITGB3P05106 788 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 CFHP08603 1231 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 TNFRSF8P28908 595 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 C1QBPQ07021 282 aaKnown RBP29.46■■■□□ 2.31
CCM2-201ENST00000258781 SCARA5Q6ZMJ2 495 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 KRT12Q99456 494 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 NAP1L3Q99457 506 aaPredicted RBP29.46■■■□□ 2.31
CCM2-201ENST00000258781 PLEKHA5Q9HAU0 1116 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 ITGA11Q9UKX5 1188 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 WEE2P0C1S8 567 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 GNAT1P11488 350 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 CTNNA2P26232 953 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 AXLP30530 894 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 ACLYP53396 1101 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 FAM47CQ5HY64 1035 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 NOTUMQ6P988 496 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 ALG3Q92685 438 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 OSMRQ99650 979 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 CDHR5Q9HBB8 845 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 NXF1Q9UBU9 619 aaKnown RBP29.46■■■□□ 2.31
CCM2-201ENST00000258781 POLIQ9UNA4 740 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 GINS2Q9Y248 185 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 DERAQ9Y315 318 aa29.46■■■□□ 2.31
CCM2-201ENST00000258781 TRIP11Q15643 1979 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 NPTXRO95502 500 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 RRM1P23921 792 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 MTFR1Q15390 333 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 PASD1Q8IV76 773 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 RNPC3Q96LT9 517 aaKnown RBP29.45■■■□□ 2.31
CCM2-201ENST00000258781 ADAM22Q9P0K1 906 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 PCDHGC3Q9UN70 934 aa29.45■■■□□ 2.31
CCM2-201ENST00000258781 CCDC66A2RUB6 948 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 KRIT1O00522 736 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 ZMYND10O75800 440 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 STAU1O95793 577 aaKnown RBP29.44■■■□□ 2.3
CCM2-201ENST00000258781 EIF4BP23588 611 aaKnown RBP29.44■■■□□ 2.3
CCM2-201ENST00000258781 CYP3A43Q9HB55 503 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 ANAPC7Q9UJX3 599 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 P4HA1P13674 534 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 CTNNA1P35221 906 aaKnown RBP29.44■■■□□ 2.3
CCM2-201ENST00000258781 SLC7A5Q01650 507 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 WDR72Q3MJ13 1102 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 NME8Q8N427 588 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 ZNF518BQ9C0D4 1074 aa29.44■■■□□ 2.3
CCM2-201ENST00000258781 FAM124BQ9H5Z6 455 aaPredicted RBP29.44■■■□□ 2.3
CCM2-201ENST00000258781 PDCD11Q14690 1871 aaKnown RBP29.43■■■□□ 2.3
CCM2-201ENST00000258781 SPOPO43791 374 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 PEX5P50542 639 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 PTP4A2Q12974 167 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 BTBD6Q96KE9 485 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 C11orf70Q9BRQ4 267 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 MRPL47Q9HD33 250 aaKnown RBP29.43■■■□□ 2.3
CCM2-201ENST00000258781 SCINQ9Y6U3 715 aa29.43■■■□□ 2.3
CCM2-201ENST00000258781 FGGP02679 453 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 PAEPP09466 180 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 BRD2P25440 801 aaKnown RBP29.42■■■□□ 2.3
CCM2-201ENST00000258781 RBP5P82980 135 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 SESTD1Q86VW0 696 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 KRT35Q92764 455 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 WNT8BQ93098 351 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 PAK6Q9NQU5 681 aaPredicted RBP29.42■■■□□ 2.3
CCM2-201ENST00000258781 DPP3Q9NY33 737 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 PCDHA3Q9Y5H8 950 aa29.42■■■□□ 2.3
CCM2-201ENST00000258781 POLR2BP30876 1174 aaKnown RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms