RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 ZBTB18Q99592 522 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 ARHGEF40Q8TER5 1519 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 P4HA2O15460 535 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 LZTS3O60299 673 aaPredicted RBP11.47□□□□□ -0.57
DCLK1-201ENST00000255448 FKBP6O75344 327 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 NR3C1P04150 777 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 MAGEA4P43358 317 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 PEX5P50542 639 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 QRICH1Q2TAL8 776 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
DCLK1-201ENST00000255448 ABCF3Q9NUQ8 709 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
DCLK1-201ENST00000255448 CCDC81Q6ZN84 652 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 NUP93Q8N1F7 819 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 RAD54LQ92698 747 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.46□□□□□ -0.57
DCLK1-201ENST00000255448 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
DCLK1-201ENST00000255448 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 HEY1Q9Y5J3 304 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 CEP152O94986 1710 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 FOXP2O15409 715 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 CD58P19256 250 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.57
DCLK1-201ENST00000255448 POU5F1BQ06416 359 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 DMC1Q14565 340 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
DCLK1-201ENST00000255448 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF554Q86TJ5 538 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 LRRC6Q86X45 466 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 PASD1Q8IV76 773 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 CDC26Q8NHZ8 85 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 SKA2Q8WVK7 121 aaPredicted RBP11.46□□□□□ -0.57
DCLK1-201ENST00000255448 ABHD8Q96I13 439 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 C11orf70Q9BRQ4 267 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 RAD21L1Q9H4I0 556 aa11.46□□□□□ -0.57
DCLK1-201ENST00000255448 TPST1O60507 370 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 USP11P51784 963 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 KCNJ2P63252 427 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 C17orf50Q8WW18 174 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 CNDP1Q96KN2 507 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 PIK3R2O00459 728 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 ITGA8P53708 1063 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 RUNX1T1Q06455 604 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 DPYDQ12882 1025 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 NFX1Q12986 1120 aaKnown RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 TTMPQ5BVD1 217 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 ADSSL1Q8N142 457 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 GUF1Q8N442 669 aaKnown RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 LENG1Q96BZ8 264 aaPredicted RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 ZFRQ96KR1 1074 aaKnown RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 LACRTQ9GZZ8 138 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.58
DCLK1-201ENST00000255448 ZNF302Q9NR11 478 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.58
DCLK1-201ENST00000255448 PFASO15067 1338 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 A0A1B0GW55 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 BCL10O95999 233 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 FAM153BP0C7A2 387 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 WASHC5Q12768 1159 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 CDO1Q16878 200 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 TRMT5Q32P41 509 aaKnown RBP11.45□□□□□ -0.58
DCLK1-201ENST00000255448 FAM153CQ494X1 144 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 C12orf60Q5U649 245 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 TTC39CQ8N584 583 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 GLMNQ92990 594 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 E2F7Q96AV8 911 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 VPS39Q96JC1 886 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 ZNF180Q9UJW8 692 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 ZSCAN5CA6NGD5 496 aaPredicted RBP11.45□□□□□ -0.58
DCLK1-201ENST00000255448 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
DCLK1-201ENST00000255448 TBC1D12O60347 775 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms